| Definition | Rhodococcus opacus B4, complete genome. |
|---|---|
| Accession | NC_012522 |
| Length | 7,913,450 |
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The map label for this gene is recD
Identifier: 226360932
GI number:
Start: 1613429
End: 1615300
Strand: Reverse
Name: recD
Synonym: ROP_15180
Alternate gene names: NA
Gene position: NA
Preceding gene: 226360933
Following gene: 226360925
Centisome position: NA
GC content: NA
Gene sequence:
>1872_bases ATGACCGAGGTGCAGGTGGCGCAGCGCGGCAAGGGGATGCTGCGGGTCTTCAACGAGGCCGGTGTGCTGGCCGCCGCGGA CGTACACGTCGCGCTGCGGTTGTCGGCGCTCGGCGGCGAATCCTCGGAAGACGTCGTGCTGGCGACCGCGCTGGCGGTGC GCGCGGTCCGGTCCGGCTCGGTGTGCCTGGACCTGACGCGGATCCGGGAAGTCACCGTCGACGAGGAATCCGAAGTCGAT CTCGACGCCCTGCCCTGGCCGGAAGACTCGACTGTCGTCGCGGCACTGCGCCGGAGCCCGCTGGTCACGGGTGGTCCCGC GGGACCGCTGCGCCCGCTGCGGCTCGTCGACACGGCCGAGGGCGGACTGCTCTACCTCGACCGGTACTTCCGGCAGGAGG CGACCATCCGGCGGGTACTCGACGAGCGCGCCGTCGGGTATCCGCTCGTCGACGAGCGGTCGCTGAGGGAGGGGCTGGAC GAGTTGTTCCGCGACCAGCACGACCACACGGCGCCGGCTCCGTCACCGGATCGGCAACGGATCGCCGCCGCCGTGGCCGC CACCCAGTGGACGTCGGTGGTGGTCGGCGGGCCGGGAACGGGCAAGACCCACACCGTCGCCCGGCTGCTGGCGTTGCTGA CCAGGCAGCCCGGACCGGGCCGGCGTATCGCGCTCGCCGCCCCCACCGGGAAGGCCGCGGCACGGCTGCAGGAGTCTGTG CGCGAGCAGGCCGACGCACTCGGGTTGCCACCCGAACTGAACGCGATGACGCTGCATCGGCTGCTGGGCTGGCAGCGTGG ACGCGGCGCCCGGTTCCGCTTCAACGCGAACAATCACCTGCCGTATGACGTGATCGTGGTCGACGAGACGTCGATGGTGT CGCTGACGATGATGTGCCGGCTCCTCGCGGCCGTCCGCCCCGACACTCGGTTGGTGCTCGTCGGCGACCCGGATCAGCTG ACGTCGGTCGACGCGGGCGCGGTCCTCGCCGATCTCGTCGCGCGGCCGGTGTCGGGAACCGAGAATCCGGTGCTCGGGCG AGTCGTCGGGGCCGACCTCGACGCCGCCGACGACCCGCTCGAGGCCGCGTTGAGTGCGAGCGAACGGGACAGGTTGCGGG GCGGAGTGGTCCGGCTCAGCCGCGGTCGGCGTTTCGGCGGCGGTATCGCGAAACTGGCTGTCGCGGTGCGGGACGGCGAG GAAGAACTGGTGATCGACATTCTGCGCGGCGGCGGTGCCCCCGAGGTGTCGTTCCACGGTCCCGAAGATCTGGACGCACT GCGGGCGGACGTGGTGGCGACGGCCGCCGCGGTCACGGATTCCGCGGAATCCGGCGATGCCTCCGCTGCGCTACAGCATT CGGAGAAACACCGGCTGTTGTGCGCGCACCGGGAAGGTCCGTACGGAGTGCAGCGGTGGGCGCGGCAGGCGATGGAGTGG ATCGGCGAGACGACGGGACAGCGACTGGACCCGGATCGCTGGTATCCGGGTCAGCCGCTGATGGTGACTGCCAATGACCA CGAGACGAAGATCTACAACGGCGACACCGGAGTGATCGTGCGTCGGGACGACGACGAACTCTTCGCCGCGTTCGTGCGGG GCACCGAACCGTTCCTGTTGCATCCGACGCATCTGTCCGCGGTTCAGACGGTGTATGCGATGACGATTCACCGCAGTCAG GGCAGCCAGTACGACACGGTGTCCGTGGTGCTGCCCGGTGCGGCGTCGTCGCTGCTGACCCGAGAATTGCTGTACACCGC GATTACCCGGGCGCGGAACCACGTGCGGATCATCGGGACCGAGGATGCGGTGCGGGCGGGAGTGCAACGCCGGGTGCTGC GAGCGAGTGGGCTTCGGAGGGCGATTCCATAG
Upstream 100 bases:
>100_bases CACCGGGTTGCGGCGTCTTCGACTGGGCGCCGCCCGCCGCGCTGATCACCGAGCTGTCCGACCTGCTGTCCGGGTCGGCC GCCGCGCAGGAGGCGGCGCG
Downstream 100 bases:
>100_bases CACGGCCTCGCACGGACGAGATCACGACGGCGAGAGTCGCCGACAGGAACACGATCTGCAGGAGTGTGCGGGGGAGCAGC GCTTCGAACGGTCCCGTCGA
Product: exodeoxyribonuclease V alpha chain
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>623_residues MTEVQVAQRGKGMLRVFNEAGVLAAADVHVALRLSALGGESSEDVVLATALAVRAVRSGSVCLDLTRIREVTVDEESEVD LDALPWPEDSTVVAALRRSPLVTGGPAGPLRPLRLVDTAEGGLLYLDRYFRQEATIRRVLDERAVGYPLVDERSLREGLD ELFRDQHDHTAPAPSPDRQRIAAAVAATQWTSVVVGGPGTGKTHTVARLLALLTRQPGPGRRIALAAPTGKAAARLQESV REQADALGLPPELNAMTLHRLLGWQRGRGARFRFNANNHLPYDVIVVDETSMVSLTMMCRLLAAVRPDTRLVLVGDPDQL TSVDAGAVLADLVARPVSGTENPVLGRVVGADLDAADDPLEAALSASERDRLRGGVVRLSRGRRFGGGIAKLAVAVRDGE EELVIDILRGGGAPEVSFHGPEDLDALRADVVATAAAVTDSAESGDASAALQHSEKHRLLCAHREGPYGVQRWARQAMEW IGETTGQRLDPDRWYPGQPLMVTANDHETKIYNGDTGVIVRRDDDELFAAFVRGTEPFLLHPTHLSAVQTVYAMTIHRSQ GSQYDTVSVVLPGAASSLLTRELLYTAITRARNHVRIIGTEDAVRAGVQRRVLRASGLRRAIP
Sequences:
NA
Specific function: NA
COG id: COG0507
COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA