Definition Rhodococcus opacus B4, complete genome.
Accession NC_012522
Length 7,913,450

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The map label for this gene is ligB

Identifier: 226360758

GI number:

Start: 1420509

End: 1422020

Strand: Direct

Name: ligB

Synonym: ROP_13440

Alternate gene names: NA

Gene position: NA

Preceding gene: 226360756

Following gene: 226360759

Centisome position: NA

GC content: NA

Gene sequence:

>1512_bases
GTGCTGTTCTCGCAGATCGTCGCGACGTCCCGGGACGTGGGGGCCACCCGCTCGCGCAAGGTGAAGGTCGCGACGCTGCG
CGAGGCGCTCACCCGACTCGAGCAGGCCGAGGTGGAACCGGTGGTGGCGTGGCTGTCCGGGGAGCTGCGGCAGGGCCGGA
TCGGAATCGGCTGGCGGACAGTCGCGGACATTCCCGCCACTCCCGCCGACGTCGCAGCCGTCACCGTGTCCGAGGTCGAC
GGGACCATCTCCGCCGTCGCCGAGGTGTCCGGCTCCGGATCGGCCGCACGCCGTCGCGAACTGCTCGCGGACCTGTTCGC
CCGCACCACCGCCGACGAGCGGGACTTCCTGCTGCGACTGCTCACCGGCGACCTCCGCCAGGGCGCGCTCGAGGGGGTGA
TGACCGATGCGATCGCGGCGGCCGCCGACCTTCCGATCGAGCCGGTGCGCCGGGCGTTCATGCTGTCGGGACGCCTGCCC
GCAACCGCGGTCGCCGCGTTCGACGGCGGCGTCGATGCCCTCACTGCGTTCCGGCTGGAGGTGGGCCGTCCGGTCCGGCC
GATGCTGGCCTCCCCTGCCGAATCGCTCGCCGACGCGTGGTCCGAACTCGGCGGCGACGTCAGCGTCGAATACAAACTCG
ACGGCGCGCGGATCCAGGTGCACCGCAACGGCGACGAGGTACGCATCTTCACTCGCACTCTGCGTGAGATCACCGGCAGC
GTGCCCGAACTCGTCGCACTCGTCGCCCGGCTGCCGTGCACGTCGGCGGTGTTCGACGGGGAGACGCTGGCGCTCACCGA
CAGTGGCCGCCCCCGGCCGTTCCAGGAGACGATGAGCCGCTTCGGTGCCGAGTCCGCCCGCGACCTGCTGCTGCACCCCT
ACTTCTTCGACTGCCTGCACCTCGACGGCGTCGACCTTCTCGACTCACCGCTGGAGGAGCGGCTGAAGGCGCTGGAACGC
GTTGCCCCGCAACACCGCATCCCCGGGCTGATCCGTCCCGACAGCGAGGGGGCCGCGACCCATTTCGACGACGCACTCGC
CGCCGGGCACGAGGGCGTGATGGTCAAGTCGCTCACCGCGCCGTACGCGGCGGGACGGCGCGGCCGCGCCTGGCAGAAGG
TGAAACCCGAGCACACCCTCGACCTGGTGGTGCTCGGCGCCGAATGGGGGTACGGGCGTCGCACCGGCTACCTGTCCAAC
CTGCACCTCGGCGCGCGCGACCCCGACGGCGGCGCACCGATCATGGTGGGCAAGACGTTCAAGGGGCTCACCGACGCGCT
GCTGCAGTGGCAGACGGACGAATTCCCGCGCCACGAACGCGCCCGCGACGACCACACCGTGTACCTGCACCCCGACCTCG
TCGTGGAGATCGAACTCGACGGCGTCCAGGTGAGCACGCGTTACCCCGGCGGGCTCGCGCTGCGATTCGCGCGGGTCCTG
CGCTACCGTCCCGACAAGACGGCCGCCGACGCCGACACCATCGACGCCGTCAGGTCCCTGCTGCCGGGGTGA

Upstream 100 bases:

>100_bases
GTGCTCATCGTCGAAGCCTAGGAACGACGGTCCGGCCGGCCCAGCGTTTGGATCAGCCGGATTCTGACCGTCCACGGGGC
GTTGCGGTTACCGTCGGGGT

Downstream 100 bases:

>100_bases
GTGCTCGTCCTGCGTGGCGCGCGCCGGGGCGGTAGCCTCCCCGGCAGAACAAGTCGCCGTGCCGCGAGGGGGTCGACCAG
TGACATTCGTGTCCCGCTTG

Product: ATP-dependent DNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>503_residues
MLFSQIVATSRDVGATRSRKVKVATLREALTRLEQAEVEPVVAWLSGELRQGRIGIGWRTVADIPATPADVAAVTVSEVD
GTISAVAEVSGSGSAARRRELLADLFARTTADERDFLLRLLTGDLRQGALEGVMTDAIAAAADLPIEPVRRAFMLSGRLP
ATAVAAFDGGVDALTAFRLEVGRPVRPMLASPAESLADAWSELGGDVSVEYKLDGARIQVHRNGDEVRIFTRTLREITGS
VPELVALVARLPCTSAVFDGETLALTDSGRPRPFQETMSRFGAESARDLLLHPYFFDCLHLDGVDLLDSPLEERLKALER
VAPQHRIPGLIRPDSEGAATHFDDALAAGHEGVMVKSLTAPYAAGRRGRAWQKVKPEHTLDLVVLGAEWGYGRRTGYLSN
LHLGARDPDGGAPIMVGKTFKGLTDALLQWQTDEFPRHERARDDHTVYLHPDLVVEIELDGVQVSTRYPGGLALRFARVL
RYRPDKTAADADTIDAVRSLLPG

Sequences:
NA

Specific function: NA

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA