| Definition | Rhodococcus opacus B4, complete genome. |
|---|---|
| Accession | NC_012522 |
| Length | 7,913,450 |
Click here to switch to the map view.
The map label for this gene is ligB
Identifier: 226360758
GI number:
Start: 1420509
End: 1422020
Strand: Direct
Name: ligB
Synonym: ROP_13440
Alternate gene names: NA
Gene position: NA
Preceding gene: 226360756
Following gene: 226360759
Centisome position: NA
GC content: NA
Gene sequence:
>1512_bases GTGCTGTTCTCGCAGATCGTCGCGACGTCCCGGGACGTGGGGGCCACCCGCTCGCGCAAGGTGAAGGTCGCGACGCTGCG CGAGGCGCTCACCCGACTCGAGCAGGCCGAGGTGGAACCGGTGGTGGCGTGGCTGTCCGGGGAGCTGCGGCAGGGCCGGA TCGGAATCGGCTGGCGGACAGTCGCGGACATTCCCGCCACTCCCGCCGACGTCGCAGCCGTCACCGTGTCCGAGGTCGAC GGGACCATCTCCGCCGTCGCCGAGGTGTCCGGCTCCGGATCGGCCGCACGCCGTCGCGAACTGCTCGCGGACCTGTTCGC CCGCACCACCGCCGACGAGCGGGACTTCCTGCTGCGACTGCTCACCGGCGACCTCCGCCAGGGCGCGCTCGAGGGGGTGA TGACCGATGCGATCGCGGCGGCCGCCGACCTTCCGATCGAGCCGGTGCGCCGGGCGTTCATGCTGTCGGGACGCCTGCCC GCAACCGCGGTCGCCGCGTTCGACGGCGGCGTCGATGCCCTCACTGCGTTCCGGCTGGAGGTGGGCCGTCCGGTCCGGCC GATGCTGGCCTCCCCTGCCGAATCGCTCGCCGACGCGTGGTCCGAACTCGGCGGCGACGTCAGCGTCGAATACAAACTCG ACGGCGCGCGGATCCAGGTGCACCGCAACGGCGACGAGGTACGCATCTTCACTCGCACTCTGCGTGAGATCACCGGCAGC GTGCCCGAACTCGTCGCACTCGTCGCCCGGCTGCCGTGCACGTCGGCGGTGTTCGACGGGGAGACGCTGGCGCTCACCGA CAGTGGCCGCCCCCGGCCGTTCCAGGAGACGATGAGCCGCTTCGGTGCCGAGTCCGCCCGCGACCTGCTGCTGCACCCCT ACTTCTTCGACTGCCTGCACCTCGACGGCGTCGACCTTCTCGACTCACCGCTGGAGGAGCGGCTGAAGGCGCTGGAACGC GTTGCCCCGCAACACCGCATCCCCGGGCTGATCCGTCCCGACAGCGAGGGGGCCGCGACCCATTTCGACGACGCACTCGC CGCCGGGCACGAGGGCGTGATGGTCAAGTCGCTCACCGCGCCGTACGCGGCGGGACGGCGCGGCCGCGCCTGGCAGAAGG TGAAACCCGAGCACACCCTCGACCTGGTGGTGCTCGGCGCCGAATGGGGGTACGGGCGTCGCACCGGCTACCTGTCCAAC CTGCACCTCGGCGCGCGCGACCCCGACGGCGGCGCACCGATCATGGTGGGCAAGACGTTCAAGGGGCTCACCGACGCGCT GCTGCAGTGGCAGACGGACGAATTCCCGCGCCACGAACGCGCCCGCGACGACCACACCGTGTACCTGCACCCCGACCTCG TCGTGGAGATCGAACTCGACGGCGTCCAGGTGAGCACGCGTTACCCCGGCGGGCTCGCGCTGCGATTCGCGCGGGTCCTG CGCTACCGTCCCGACAAGACGGCCGCCGACGCCGACACCATCGACGCCGTCAGGTCCCTGCTGCCGGGGTGA
Upstream 100 bases:
>100_bases GTGCTCATCGTCGAAGCCTAGGAACGACGGTCCGGCCGGCCCAGCGTTTGGATCAGCCGGATTCTGACCGTCCACGGGGC GTTGCGGTTACCGTCGGGGT
Downstream 100 bases:
>100_bases GTGCTCGTCCTGCGTGGCGCGCGCCGGGGCGGTAGCCTCCCCGGCAGAACAAGTCGCCGTGCCGCGAGGGGGTCGACCAG TGACATTCGTGTCCCGCTTG
Product: ATP-dependent DNA ligase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>503_residues MLFSQIVATSRDVGATRSRKVKVATLREALTRLEQAEVEPVVAWLSGELRQGRIGIGWRTVADIPATPADVAAVTVSEVD GTISAVAEVSGSGSAARRRELLADLFARTTADERDFLLRLLTGDLRQGALEGVMTDAIAAAADLPIEPVRRAFMLSGRLP ATAVAAFDGGVDALTAFRLEVGRPVRPMLASPAESLADAWSELGGDVSVEYKLDGARIQVHRNGDEVRIFTRTLREITGS VPELVALVARLPCTSAVFDGETLALTDSGRPRPFQETMSRFGAESARDLLLHPYFFDCLHLDGVDLLDSPLEERLKALER VAPQHRIPGLIRPDSEGAATHFDDALAAGHEGVMVKSLTAPYAAGRRGRAWQKVKPEHTLDLVVLGAEWGYGRRTGYLSN LHLGARDPDGGAPIMVGKTFKGLTDALLQWQTDEFPRHERARDDHTVYLHPDLVVEIELDGVQVSTRYPGGLALRFARVL RYRPDKTAADADTIDAVRSLLPG
Sequences:
NA
Specific function: NA
COG id: COG1793
COG function: function code L; ATP-dependent DNA ligase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA