| Definition | Rhodococcus erythropolis PR4, complete genome. |
|---|---|
| Accession | NC_012490 |
| Length | 6,516,310 |
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The map label for this gene is recB
Identifier: 226304347
GI number:
Start: 948812
End: 952129
Strand: Direct
Name: recB
Synonym: RER_08580
Alternate gene names: NA
Gene position: NA
Preceding gene: 226304346
Following gene: 226304348
Centisome position: NA
GC content: NA
Gene sequence:
>3318_bases GTGGACTTCGACCTTTTGGGGCCACTACCGACCGGCACCACGGTGTTGGAAGCGAGCGCCGGAACTGGCAAGACCTACGC GATCGTCGGACTCGCAACCCGTTGTGTTGCCGAAGGTCTCGCTGACATTTCGCAAGTTCTGCTGGTGACATTCAGCCGGG CCGCCACTCAGGAACTTCGTGAGCGTGCCAGGGAGAGGTTCGCCGGAGTGTCCGCCGCTCTGGTCGACCCGGAGGCGGCG AGGCGGTCGGATGATGATCTGGTGGCGTACCTCGCCACAGCTGACGACGAGGAGATCGGCGTGCGGCGTCGTCGACTCCT GCGCGCTCTCGCGGAGTTCGACGCCGGCACCATCACGACCACCCACAGTTTCTGTCAGAGGATGCTCGACGGACTCGGCA TCGCCGGGGAACGCGAACCGGACACAACTTTTGTGGAGTCGGTCGACGACCTGATCAGTGAGGTCGTCTCGGATTTGTAC CTCAGCCGCTACAGCCGGACGGACTCGTCTCCACCGTTTTCCACGAAGGACGCGCTGGCCATTGCCCGAATCGCAGTCGG CGATGGCCAGGCAATTCTCGAACCCGACGGCGAGGAGGAGACCGCTCCCGGTCAGCGCGTCCTGTTCGCGGCGGCTGCTC GTCTCGAGGTCGAACGACGTAAGCGGACCAAAGGAATTCGCGACTTCAACGATCTCCTGACGCTGCTGCACGGCGTGTTG ACGGATCCGGAATACGGCCCCGTGGCGTGCCGTCGGGTGCGCGAAAAGTTCAAGGTCGTGCTGATCGACGAGTTCCAGGA CACCGATCCGTTGCAGTGGGACATTCTGCGGTTGGCCTTCCACGGACACACCACCCTGGTCCTGGTCGGTGATCCCAAGC AAGCTATCTACGCGTTCCGCGGTGCAGAAGTCCTGAGCTATCTCGATGCGGTCGATCAGGCGGATGCACACCAGGAATTG ACCACCAATTGGCGCAGCGATCCAGGGTTGTTGGCGGCACTCGAACACCTCTACGGCGGCGCCGCACTGGGTAACGAGGG TATCGTCGCGCATCCAGTGGAGGCGTCGCACAAGAAGTCTCGGTTGTCCGGCCCGGTGCCGATGCGTGTACGCCATCTGC CGCGTACCGGAGCCGGACCGCTCAATCGTTCGGGATTTCCGGCCGTAGGCAGACTTCGCAGTCGCGTCGCGGACGACGTC GCAGCAGACGTGGTCGGACTGCTGGGCAGCGATGCCCGCTTGGCGGTCGACGGTGATCCGCGCCCGGTCGAGCCGGGAGA CGTCGCGGTATTGGTGCGCACCCACAAGCAGGTGGCGATGATTCGCGATGCCCTCGATGCCGTAGGTGTACCTTCCGTAT TGACCGGCGGTTCCAGTGTTTTCGCGACACCCAGCGCAACACAGTGGCTGTGGCTGCTGCAGGCGATCGAGCAGCCGCAC CGGTCTGATCGCGTCCGGTTGACCGCCCTCTCTCCGATTTTCGGGCGCACCGCCGAAGAATTGGACGTCGACGGCGACAA CGTCGTCGCGGAACTCGCGGGTCAACTGCGCTCATACTCCGGGTTGTTCGCACGCGTCGGGTTCGCGGCCGTGTTCGAAA GGATCTCCGCCGAAACGAATCTGGAGAAGCGTGTACTCGCGGCCCCGTCCGGCGAACGAGATTTCACCGATCTGCGGCAC GTCGCACAACTTCTCGGCCGCGTCGCCACCGAGGAAGCGTTCGGGTTGAGCGCATTGGTTCGCTGGCTCTCCGATCGGAT CAAGGACCCGACGTCCGGGAGTGCCACCGACAGAAGCCGTCGCCTCGACAGCGATGCTGCCGCTGTACAAATCGCAACCG TGCACGCCACCAAAGGGCTCGAATTCCCGATCGTCTACGTCCCGTTCAGTTGGGAGAGCGTAGGCGGCTTCAACTCTCCG ACGCAGTTGTTGCACGATCCGGATGGGCGCCGCATCCTCGACGTCGGTGGGCAGGAAGGCCCGGGGCACAACGCCAGAAA GACTGTTGCGGAGGCTGAAGAAGCGGGCGAAGAACTGCGGCTGCTGTACGTGGCGCTGACCCGGGCGCAGTGCCAACTAG TGCTCTGGTGGGCGCCAAGCTACGGGACCTCACGCTCGCCACTGCACCGGTTGATGCTCGGACGTACACCCGGCATCGCC GAACCTGCTCGGGTAGTGAAGGTGCTCGACGACGGTACAACCGCAGCACGACTCGCGACGTGGCCGGCAGCAGCTTCCGA TGTGATCTCGGTGGAACCTGTTGGTCCACATCCACCGTCGCCCGTCCAGTGGTCCGGTGCAGCCGCGAACGTGACCGAAC TGGCCGCGGCGCGTTTCGATCGAGACCTGGACACTCTCTGGCGTCGTACGTCGTACTCGGCACTGACCGCCGGAGCTCAC CACGCGGTCACGTCCACCGACAGCGAGGTAGAGGATCCCGAAAAGGACGACGAGCCAGAGGATTCCGTAGACTTCGGGAC CGTCACCCCCTCACCGCTGGAGGCGTTGCCTTCACCGATGAACGGTCTTCCGGCGGGCGCCGCATTCGGCACGCTGGTGC ATGAAGTGCTCGAGGTGGTGGACACTGCTGCTTCAGACCTGAGAGCGGAACTCGGTATACGCTGCGCCGAGGCGGTCTCG GTTCGGGCGGCCGAGGTCGACTCCGAAGCACTCGCGGATGCGTTGTTGCTGGTGATGCAGACTCCACTGGGATTCGGAAC CTTGGCCACGATCGCGCCGAAGGATCGTCTTCCCGAACTCGATTTCGAACTCCCACTGGCCGGTGGCGACGATCCGGTGT CGATGAGTGTCACACTTCGCGGAGTGTCGGAACTGTTGAGGCGCCACCTTCCCCCGGACGACATTCTGGCGTCGTACGCC GACCATCTTGACCGTGTCGAGACGTCACCGATGCGCGGGTTCCTGACGGGCAGTATCGACGCCGTCTTGCGGATCCCGGG CCCGTCGTTCGTGATCGTCGACTACAAGACAAATCGGCTGGGCCGCGGCGATCTGACGGCTGCCAACTACACGCGCGAAC TCATGGCGACGGAGATGATGCGCTCGCACTATCCCTTGCAGGCACTGCTGTATTCGGTTGCGCTGCATCGGTATCTGCGG TGGCGACTGCCCGACTACGATCCGCATCGCCATCTCGGGGGTGCGCAGTATCAATTCGTGCGTGGGATGCTCGGCCCGGA CAGTCCGCCGGAATGTGGTGTATTCGAATGGAAACCGCCTGCTCAGCTGACGGTTGAACTATCGGATCTGCTGGCCGGTC TTGATGCGTCCCACACAGTAGGGGAGAAGATTCGATGA
Upstream 100 bases:
>100_bases GGACGACGAATTCGTCTGGGCCGAGGAACCGACTCGATTCGGAGTTCTCGCCCGACGACTGTGGGATCCGTTGCTGACCA ACGAAAGAGCGGAGTAACCC
Downstream 100 bases:
>100_bases CCGAGGCGCAATTGGCGCAGCGCGCCAAAGGGATCGTGCGAATCTTCAACGAAGCCGGGGTTCTGGTTGCCGCCGACGTT CATGTCGCGATGAGAGTGTG
Product: exodeoxyribonuclease V beta chain
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1105_residues MDFDLLGPLPTGTTVLEASAGTGKTYAIVGLATRCVAEGLADISQVLLVTFSRAATQELRERARERFAGVSAALVDPEAA RRSDDDLVAYLATADDEEIGVRRRRLLRALAEFDAGTITTTHSFCQRMLDGLGIAGEREPDTTFVESVDDLISEVVSDLY LSRYSRTDSSPPFSTKDALAIARIAVGDGQAILEPDGEEETAPGQRVLFAAAARLEVERRKRTKGIRDFNDLLTLLHGVL TDPEYGPVACRRVREKFKVVLIDEFQDTDPLQWDILRLAFHGHTTLVLVGDPKQAIYAFRGAEVLSYLDAVDQADAHQEL TTNWRSDPGLLAALEHLYGGAALGNEGIVAHPVEASHKKSRLSGPVPMRVRHLPRTGAGPLNRSGFPAVGRLRSRVADDV AADVVGLLGSDARLAVDGDPRPVEPGDVAVLVRTHKQVAMIRDALDAVGVPSVLTGGSSVFATPSATQWLWLLQAIEQPH RSDRVRLTALSPIFGRTAEELDVDGDNVVAELAGQLRSYSGLFARVGFAAVFERISAETNLEKRVLAAPSGERDFTDLRH VAQLLGRVATEEAFGLSALVRWLSDRIKDPTSGSATDRSRRLDSDAAAVQIATVHATKGLEFPIVYVPFSWESVGGFNSP TQLLHDPDGRRILDVGGQEGPGHNARKTVAEAEEAGEELRLLYVALTRAQCQLVLWWAPSYGTSRSPLHRLMLGRTPGIA EPARVVKVLDDGTTAARLATWPAAASDVISVEPVGPHPPSPVQWSGAAANVTELAAARFDRDLDTLWRRTSYSALTAGAH HAVTSTDSEVEDPEKDDEPEDSVDFGTVTPSPLEALPSPMNGLPAGAAFGTLVHEVLEVVDTAASDLRAELGIRCAEAVS VRAAEVDSEALADALLLVMQTPLGFGTLATIAPKDRLPELDFELPLAGGDDPVSMSVTLRGVSELLRRHLPPDDILASYA DHLDRVETSPMRGFLTGSIDAVLRIPGPSFVIVDYKTNRLGRGDLTAANYTRELMATEMMRSHYPLQALLYSVALHRYLR WRLPDYDPHRHLGGAQYQFVRGMLGPDSPPECGVFEWKPPAQLTVELSDLLAGLDASHTVGEKIR
Sequences:
NA
Specific function: NA
COG id: COG1074
COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA