Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

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Identifier: 226228276

GI number:

Start: 3372817

End: 3375288

Strand: Direct

Name: Not Available

Synonym: GAU_2870

Alternate gene names: NA

Gene position: NA

Preceding gene: 226228274

Following gene: 226228281

Centisome position: NA

GC content: NA

Gene sequence:

>2472_bases
ATGACGGCTTCATCCCGCCCGCTCCTCTCAGCCCTGCTCCTGTTGGCCAGTCTGGCCGGCGCACCGCACCTCGCGGTGGC
CCAGGATGCACCCCAGACATCTGTTGGCCCCGGCGCCACGGCCCGGATCACCGTGCAGCACGATGGTGCACCGGTGCCGG
CAGTTCGTGTGCGTGTCCTGGTCGACTCGGCACAGACGGACACCACCAACGGCATCACCGACGCCCGAGGCATGGTCACG
TTGCGGGTGACGCCCGGTGCGCGCGCGTTCCTGCTCACCCGGGTGGGCTTCCGGCCCGACACCCTGCGCACGCAGCTCGT
GGCTGGCCAGGACACCAGCTTTGTGGTGACCATGGAAGCGCTGCACACGGAACTCTCTGGTATGGTGGTGTCGGCCACAC
GCTCCGAACGGCGGGTGGAAGACACCCCACTGCGCGTGGAGGTGATCGATGAGGAGGAGATCGCCGAAAAGGTGGCGATG
ACCCCCGGCGACATCGCGATGATGCTGAATGAAACCAGCGGCCTGCGGGTGCAGACCACCAATCCCTCGCTGGGCGGCGC
GAACGTGCGGGTGCAGGGACTTCGTGGACGCTACACCCTGATCCTGGCCGATGGGTTGCCGCTGTACGGCGGACAGGCCG
GTGGACTCGGGTTGCTGCAGATCCCGCCCGTGGATCTCGGTCGAGTAGAAGTGATCAAAGGCACCGCGTCGGCGCTCTAC
GGCAGCTCGGCACTGGGTGGCGTGATCAACCTGGTGAGTCGACGCCCGGCCGACGAAGCGGAGCGCACCATCCTGCTCAA
CCAGACATCACGTGGTGGCTCCGATGCGGTGTACTTCGGGTCCGGGCGTCCGGCCGACGGTGTGGGTTATACGCTGCTGG
CCGGCGCGCACCGGCAGGGTCGCCGCGACCTTGATGCCGACGGCTGGACCGATCTGCCGGGCTATGAGCGATTCGTGGTG
CGTCCGCGACTCTATCTCGACAACGGACGCGGACGCTCGGCCTTCCTGACAACCGGCGTCACCGCTGAAGATCGCACCGG
TGGCACCATGCCCGACGCCACCGTACCAACAGGTGGAGCCTTCCGTGAATCGTTGCGCACCCGCCGCGGCGATGTGGGTG
GTCTGTTGCGTTGGACCCTGGGCAGCAAGCAGAGCGATAGCTACACCTATGAAGCCGACAGCGATCCTGTCGATTCAGAC
ACGCATCGCGCCGTGCTCTCCATGCGGGCGTCAGCCATGCAGCAACAGCACAACCATGTGATGGGTGCCCAAACGGAAAA
GGACAATCACGGCACCTGGTTCGCCGAGGCAACGATCGCCAAGCCCACGGATCGCGCCGTGTATGTCGCGGGTGTGGCCG
CGCAGCAGGATCGCTATCGCAACAGCACGTTCGCCAATTTCAACTACACGTTCACGGCACCGGCAGCGTTTGTGCAGGCC
GATGTGGATGCCACGACCTGGCTGTCGCTATCGTCGACCGCCCGTGTGGACTTTCACAGTCACTATGGCACGGTGTTCAA
CCCACGGGTCTCGATGCTCCTGCGTGCACCTGAATCGCCCGTGTTGGACGGATGGACTGCCCGATTCTCCGCCGGGACCG
GTGCCTTCGCACCAACGCCGTTCACTGAAGAGACCGAAGCAACGGGCCTCGCACCACTGCGTGCGTTGGGCAACCTGAGT
GCGGAGCGGGCATCCGGTGGATCGATCGATATCGGTGGCCCGGTGCGCATGGGCTGGGGTCAGCTCGATCTCAATACCAC
GGCGTTCGGCTCACGTGTGACCTCGGCCCTGCAGGTGCGCAGCATCGGCGGCACAACGCCCAACGGTGCCACCCGCATCG
AACTGCTCAACAGCGCCGCGCCCACTCGCACCTGGGGTGGAGAGTTGTTGGCACGCCTCACCCGGCCGCTTGGCGGGGGC
GAGGACGATGACCATGACGACGAGAAACCATCGAGCGAGCGCGGCAATCATGGCGCCGCGCGTGGCGAGAGTCACGGCGA
TGATCATGGCGATGATCATGGCGAGGGCGCCGTGTGGCGCACCACCGCGTCCATGACACTGCTGCGGGCCACCGAGTGTG
CACCGGAGCAGTCGGTGGTGCAGTGCGTGCGGCGCGATGTGCCCCTCACGCCGCGGGTCAGCGCCGGTCTGGTGAGCGCG
GTGGAATGGGAGGGCGTACAGCGTGTGGGTCTCGAGGTCTACTACACCGGGCAGCAGTCCCTCGAGGAAAACCCGTACCG
GCAGACGAGCCGGCCCTATGTGATCGTTGGTCTGCTCGGCGAGCGAGTGTTCAAGACGCCCATGGGCGCCATGCGGGTGT
TCGTGAATCTCGAGAACATCACCAACGTGCGTCAGACCCGATTCGACCCACTGCGACTGCCTGCGCGGGGCATGGGCGGG
CGATGGGCCACCGATGCCTGGACCGATCTCGTGGGCTTCACCACCAACGCCGGTATCCGCTGGTCACTCTGA

Upstream 100 bases:

>100_bases
TCGCTGATGATGAGCAGTTCGGGGGAGGCGTTCGGCATGAGGCGCACGGGAGGTAGAAGACCGTTGACCTTGTAGTCACT
ACAAAGAATAGCTTGATGGC

Downstream 100 bases:

>100_bases
CCAGACGGCGGCGCGTTCGGCGATGGCGTCGATGTCATCGCCAACCGCCTTGGTGTCGGACTCGCTTTCCGGTGGACTGA
ACCACTCCCAGCGCATACGC

Product: TonB-dependent outer membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>823_residues
MTASSRPLLSALLLLASLAGAPHLAVAQDAPQTSVGPGATARITVQHDGAPVPAVRVRVLVDSAQTDTTNGITDARGMVT
LRVTPGARAFLLTRVGFRPDTLRTQLVAGQDTSFVVTMEALHTELSGMVVSATRSERRVEDTPLRVEVIDEEEIAEKVAM
TPGDIAMMLNETSGLRVQTTNPSLGGANVRVQGLRGRYTLILADGLPLYGGQAGGLGLLQIPPVDLGRVEVIKGTASALY
GSSALGGVINLVSRRPADEAERTILLNQTSRGGSDAVYFGSGRPADGVGYTLLAGAHRQGRRDLDADGWTDLPGYERFVV
RPRLYLDNGRGRSAFLTTGVTAEDRTGGTMPDATVPTGGAFRESLRTRRGDVGGLLRWTLGSKQSDSYTYEADSDPVDSD
THRAVLSMRASAMQQQHNHVMGAQTEKDNHGTWFAEATIAKPTDRAVYVAGVAAQQDRYRNSTFANFNYTFTAPAAFVQA
DVDATTWLSLSSTARVDFHSHYGTVFNPRVSMLLRAPESPVLDGWTARFSAGTGAFAPTPFTEETEATGLAPLRALGNLS
AERASGGSIDIGGPVRMGWGQLDLNTTAFGSRVTSALQVRSIGGTTPNGATRIELLNSAAPTRTWGGELLARLTRPLGGG
EDDDHDDEKPSSERGNHGAARGESHGDDHGDDHGEGAVWRTTASMTLLRATECAPEQSVVQCVRRDVPLTPRVSAGLVSA
VEWEGVQRVGLEVYYTGQQSLEENPYRQTSRPYVIVGLLGERVFKTPMGAMRVFVNLENITNVRQTRFDPLRLPARGMGG
RWATDAWTDLVGFTTNAGIRWSL

Sequences:
NA

Specific function: NA

COG id: COG4771

COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA