| Definition | Gemmatimonas aurantiaca T-27, complete genome. |
|---|---|
| Accession | NC_012489 |
| Length | 4,636,964 |
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The map label for this gene is pilB
Identifier: 226227976
GI number:
Start: 3012749
End: 3014653
Strand: Reverse
Name: pilB
Synonym: GAU_2570
Alternate gene names: NA
Gene position: NA
Preceding gene: 226227977
Following gene: 226227975
Centisome position: NA
GC content: NA
Gene sequence:
>1905_bases GTGGGGAACCACCCCCTTCTGGATATCACACCACGTACGTGTTCAGACGGAAATCACGTCACTATGGCCGCTCCTGCTGC ACCGCTGGCGAGTCGCTCCACGGACCGACTCGGCGATCTCCTCGTCCGCGAGGGGTTGTTGTCACGCGAAAACCTCACCA AGGCACTGCAGGAGCAGTCCGCATATCCGGGACAGCGTCTCGGACTGACCGTCGTCCGACTCGGCATGGTGCCGGAGACC GAAGTGGTCCGCATGCTGGCGCGACAGTACCGAATGCCAGCCGTCGACCTCGCGCGTTTCGAGGTGGATACTCGGCTCCT CAAGCTGATCCCCGCCGAACTCGCCTCCAAGCACACGGTTCTGCCGCTCAAGCGCGACGGACGTCAGCTCACGGTCGCCA TTGCCGATCCCACGGCGATGGCCGTGGTGGACGATCTCAAGTTCATCACCCGCTATGACATCGTCCCGGTGCTGGCGGGC GAGTACTCCATGCGGGCGGCGATCGAAAAACACTACGAAGCGAACGAAATCCACATGCAGTCCCTGCTGCAGGACATCGC AGCAGATGATGACGATATCGAGGTGCTCGACAACCAGGACGACATGGTCGATGCCAGTGTCCTGGCCGCTCAGGTCGATG AGGCACCGGTCGTCAAGCTCATCAACGCCATCCTTGGCGATGCCGTGCACAAAGGCGCGTCGGATATCCACTTCGAGTGC TTCGAACACGAACTGCGGGTCCGCTATCGCATCGACGGCGCGCTGCAGGAAGTGATGAAGCCACCCATGAAGATGCGCGC CGCGCTCATCTCGCGCTTCAAGATCATGTCGTCCCTGAACATCGCAGAACGCCGCGTACCGCAGGACGGCCGCATCAAAC TCAAGATCGGCCGAAAGGTCATCGACTTCCGCGTCAGCACCCTGCCCACGCTTTTCGGCGAAAAGGTCGTCCTGCGAATT CTCGACAAAGGCAACCTCACCCTCGAACTGGACAAGTTCGGTATTGAGCCTCGCGCCGAACGGGAACTCATGGAGGCGAT CTCCAATCCGTACGGCATGGTGCTCGTGACCGGCCCCACGGGATCGGGTAAGACCACCACCCTGTATTCGGCTCTGTCGA AGATCAACAATCTCGACACGAACATCATGACGGCCGAAGATCCCGTGGAGTACAACCTCTTCGGCATCAATCAGGTGCAG GTACGCACCGAGATCGGCATGTCCTTCGCCGCCGCGCTGAAAGCGTTCCTGCGACAGGATCCGAACGTCATCATGGTCGG CGAAATCCGCGATCTCGAAACCGGCGGTATTGCTGTGAAGGCCGCGCTCACCGGCCACATGGTCATGAGCACCCTGCACA CGAATTCGGCGCCCGAAACCATCGTCCGCCTGCTGGACATGGGTCTCGAACCGTTCAACGTGGCGTCCGCGCTCAATCTC ATCCTAGCGCAGCGACTCGTCCGACGCATCTGCCCGAAGTGTCGCGTGAAGTACCAGCCCGACGTGGCGGAACTGTCGGG CGCCAAGGTCAAGCTCGACACCACCATGCGCGAACTGCGTTTCACCGAGGAAGCCCTCGCCAATGCCAAGGCCAAGGCCA CGCCGGAGGCAATGCCGTTCCTGACCAACCTCTGCCTCGATACCCGTGTCGGCGATCTGCCCTTCTTCAAGGGCCATGGC TGTGACGCCTGTGCCGGCACTGGTCTCAAGGGGCGTCAGGGTGTCTACGAAGTGATGTTCATGACCCCCACGCTCAAAAA GCTGGTCATGCAGAACTCCGACGTGCAGGTCATCCGCGATGCGGCCGTTGAAGAGGGCATGTTGACGCTGCGCATGGATG GTTGGCTGAAGGTGCTGAAGGGGGTGACCACCCTCGATCAGGTCATCCGCGAAACGGCAAACTGA
Upstream 100 bases:
>100_bases TCGCTGGACGACCTGCGTCACGTCCGTGGCATCGGACCAGCCACTCTGCGCCTGTTCGACACCCTGGTGACGTTTTCAGG CCGGCACAGTCCCATACACA
Downstream 100 bases:
>100_bases GTTTTTGTGATACCGTCGTTTCCTGTCGCTATGACGACTCGTCCAGACCGTGGCGTATCACTGCGCCCCCGCTTCCCGAT CGCCTCACAATGACCGCACC
Product: type IV pilus assembly protein PilB
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>634_residues MGNHPLLDITPRTCSDGNHVTMAAPAAPLASRSTDRLGDLLVREGLLSRENLTKALQEQSAYPGQRLGLTVVRLGMVPET EVVRMLARQYRMPAVDLARFEVDTRLLKLIPAELASKHTVLPLKRDGRQLTVAIADPTAMAVVDDLKFITRYDIVPVLAG EYSMRAAIEKHYEANEIHMQSLLQDIAADDDDIEVLDNQDDMVDASVLAAQVDEAPVVKLINAILGDAVHKGASDIHFEC FEHELRVRYRIDGALQEVMKPPMKMRAALISRFKIMSSLNIAERRVPQDGRIKLKIGRKVIDFRVSTLPTLFGEKVVLRI LDKGNLTLELDKFGIEPRAERELMEAISNPYGMVLVTGPTGSGKTTTLYSALSKINNLDTNIMTAEDPVEYNLFGINQVQ VRTEIGMSFAAALKAFLRQDPNVIMVGEIRDLETGGIAVKAALTGHMVMSTLHTNSAPETIVRLLDMGLEPFNVASALNL ILAQRLVRRICPKCRVKYQPDVAELSGAKVKLDTTMRELRFTEEALANAKAKATPEAMPFLTNLCLDTRVGDLPFFKGHG CDACAGTGLKGRQGVYEVMFMTPTLKKLVMQNSDVQVIRDAAVEEGMLTLRMDGWLKVLKGVTTLDQVIRETAN
Sequences:
NA
Specific function: NA
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA