Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

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The map label for this gene is topA

Identifier: 226227915

GI number:

Start: 2940205

End: 2942655

Strand: Reverse

Name: topA

Synonym: GAU_2509

Alternate gene names: NA

Gene position: NA

Preceding gene: 226227916

Following gene: 226227914

Centisome position: NA

GC content: NA

Gene sequence:

>2451_bases
GTGGCCAAGTCGCCTGCGCGCAAGACTCCGGTCTCCAAGACGGCGGTTCGCAAGACCGCCGCTGGAAAGACCACCGCTCG
CAAGGCCGCGGCCCGCGCGGAAGCGATAGATCTGCCAGAGGATGATGAGCCCGCGCCGGCCGGCGGCACGTCACTGGTCA
TCGTCGAGTCTCCAGCGAAGGCCAAGACCATCGGCAAGTATCTCGGTCGTGGTTACACGGTGAAGGCCACCGTCGGGCAC
GTGCGTGACCTGCCCGCCAAGAAGCTCGGCATCGATATCGACCACGGCTTTGCCCCCGAATACGTCACCATCGAGGGCAA
GGAAGACATCCTCACGGATCTCAAAAAGGTCGCCAAGGGCGCGCGCGAAATCTTCATCGCCACTGACCCTGATCGCGAAG
GTGAAGCGATCGGGTGGCACGTGGAACAGTATTTCACGCAGCCCAAGCGGCATGCCGTCTCGGCGCCGATCCGGCGCGTG
ATGTTCCACGAGATCACGAAAGACGCCGTGCACAAGTCCATGGCCAAGCCCATGGACATCGACAACAAGAAGGTCGAGGC
CCAGCAGGCCCGGCGCGTGCTCGATCGACTGGTCGGCTACAAAGCCAGCCCGGTGCTCTGGAAGACCGTCAAGAAAGGCC
TTTCCGCTGGCCGTGTGCAAACCGTGGCGCTCCGACTCATTGTGGAACGCGAACGCGAAATCCGTGCGTTCACGCCCGTC
GAGTACTGGAGCATCGCGGCCGATCTGCAGAAGGGGCAGCAGCCGTTCACGGCCAAGCTCCATCAGCTCGATGGCAAGAA
GCCGGAGATCGGCAACGGCACGGAAGCCGAGCGGATCATCGCCGATCTGGCTGGTCGCAAGGAGTTTGTCGTTACCGAGG
TGAAGCGTCGCGAACGGCGCAAGAATCCGGCGGCGCCCTTCACGACCTCCACGTTGCAGCAGGAAGCGGCCAAGAAGCTC
GGTTTCGGATCCAAGCGCACCATGCGACTCGCGCAGGATCTGTACGAAGGCATCGACGTGGGAATCGACGGCGCGACGGG
TCTGATTACCTACATGCGTACCGACTCCACGCGTGTCTCGGAAGACGCCGCAAACTCGGCGCGTGAATCGCTGCGTGCCC
AGTTCGGCGACGACTTCCTCGCACCAGCGCCGCAGCTCTATCCGAGCGGCAAGGCCAATGCGCAGGACGCACACGAAGGT
GTGCGCCCCACGGATCCGTCACGTCGTCCGGAGCAAGTGCAGAAGTTCCTGACGGCCGATCAGTTCAAGTTGTACCAGCT
CATCTGGCAGCGCTTCATGGCGTCGCAGATGGCACCGGCGGTGTTCGATACCACCACCGTCGACTTCAATATCCCGATCA
AGGTGGCCGACGCGGAGCGCAACTATCTGTTCCGCGCGACCGGCTCGGTGGTGAAGTTCCAGGGTTTCCTGGCGTTGTAT
CGCGAAGCCCGCGAAGAGGGCGATGCCAAGGCGCTCGAAGATGAACAGGCACTACCGGTGCTGGAAGTCGACGAGCGGGT
GCCGGTCAAAGCCATCACACCTACGCAGCACTTCACCGAACCGCCGCCGCGTTTTTCGGAAGCGTCGCTGGTGAAGGAAC
TCGAGCGCGCCGGGATCGGCCGCCCGTCCACCTACGCGTCCATCATTTCGGTGCTGGTCGAGCGACGGTACGTCTCGCTC
GAGCAGCGCCGGTTCTTCCCCACCTCCCTTGGGGAAACGGTGGAGAAGGTGATGGTGAAGAAATTCCCCGACGTCTTCAA
CGTCGGCTTCACGGCGCAGATGGAAGAGGAGCTCGACAAGATCGCCGAAGGTGAGATCGATTGGGTGCGCGCGCTGGGTG
ATTTCTGGACGCCCTTCCAGCGCACGCTCAATGACAACGACCTCGATGCGCTCATCGGCGAAGCCTACGATCTGTCGGCG
CTCGAGACCGAGCGTTGTCCGGATTGTGGCGGCAAGCTGGTCGCCAAGGGTGGTTTCTTCGGACCGTTCGTGGCCTGTGA
GAACCACCCCAAGGCCTGCAAGTACACGCGCCCCATCAAGGGGGAGAAGAAGCCGGCTGAGCTGACGAACTACATGTGTC
AGGAGTGCGGCGCGCCAATGGTCATTCGTCATGGCCGCTCCGGCGACTTCCTTGGCTGCAGCAAGTTCCCGAAGTGCCGG
GGCACCCGCTCCATGCCCACGGGCGTCAAGTGTCCCAAGGATGGAGGCGAGATCGCCGAGCGTCGCTCCAAGAAGCGCGG
CAAGGCGTTCTACGGCTGTGAGAACTACCCCAACTGCGACTTTGTGGTATGGGACAAGCCTGTCGCCGAGACGTGTCCTG
AGTGTGGGTACGTGGGGGCCGAGGCCAAGAGCAACAAGACGCGCGGGAGCTTCCGGAAGTGTCTCAAGTGCAGCAACGAG
TGGGATGTCGCTGCGCCTGACGAGGCTGCGGAAGTCGCTGAAGTCGCGTGA

Upstream 100 bases:

>100_bases
GCAGATGCCAATTAAGAAAGCTGCCAAGAAGGCGGCGACGAAGAAGTCCGCAACGAAAGCCCCCGCGAAAAAGGCTGCAA
CCAAGGTTGCTGCCAAGTCC

Downstream 100 bases:

>100_bases
GCGACATTCCGACGACCGCGTCACGGGATACCACAGCTCCAGTCCACATTGTCGGCGGCGGTCTTGCCGGCAGCGAAGCG
GCCTGGCAGCTCGCTGAGCG

Product: DNA topoisomerase I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>816_residues
MAKSPARKTPVSKTAVRKTAAGKTTARKAAARAEAIDLPEDDEPAPAGGTSLVIVESPAKAKTIGKYLGRGYTVKATVGH
VRDLPAKKLGIDIDHGFAPEYVTIEGKEDILTDLKKVAKGAREIFIATDPDREGEAIGWHVEQYFTQPKRHAVSAPIRRV
MFHEITKDAVHKSMAKPMDIDNKKVEAQQARRVLDRLVGYKASPVLWKTVKKGLSAGRVQTVALRLIVEREREIRAFTPV
EYWSIAADLQKGQQPFTAKLHQLDGKKPEIGNGTEAERIIADLAGRKEFVVTEVKRRERRKNPAAPFTTSTLQQEAAKKL
GFGSKRTMRLAQDLYEGIDVGIDGATGLITYMRTDSTRVSEDAANSARESLRAQFGDDFLAPAPQLYPSGKANAQDAHEG
VRPTDPSRRPEQVQKFLTADQFKLYQLIWQRFMASQMAPAVFDTTTVDFNIPIKVADAERNYLFRATGSVVKFQGFLALY
REAREEGDAKALEDEQALPVLEVDERVPVKAITPTQHFTEPPPRFSEASLVKELERAGIGRPSTYASIISVLVERRYVSL
EQRRFFPTSLGETVEKVMVKKFPDVFNVGFTAQMEEELDKIAEGEIDWVRALGDFWTPFQRTLNDNDLDALIGEAYDLSA
LETERCPDCGGKLVAKGGFFGPFVACENHPKACKYTRPIKGEKKPAELTNYMCQECGAPMVIRHGRSGDFLGCSKFPKCR
GTRSMPTGVKCPKDGGEIAERRSKKRGKAFYGCENYPNCDFVVWDKPVAETCPECGYVGAEAKSNKTRGSFRKCLKCSNE
WDVAAPDEAAEVAEVA

Sequences:
NA

Specific function: NA

COG id: COG0550

COG function: function code L; Topoisomerase IA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA