Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

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Identifier: 226225466

GI number:

Start: 73152

End: 75851

Strand: Reverse

Name: Not Available

Synonym: GAU_0060

Alternate gene names: NA

Gene position: NA

Preceding gene: 226225467

Following gene: 226225465

Centisome position: NA

GC content: NA

Gene sequence:

>2700_bases
ATGTCCATTTTCGACGGATGGCGTCATCGACTGCATGTGCTGCTCAACCGCTCGGCCTACGATGAAGAGCTCGCCCGCGA
ACGAGCATTCCACCTCTCCCTCGAGGAGATGCATCAGCGGGCCGATGGTCATGCACCACCCGAGGCTCGTGCTGCAGCGC
GCCGGCGATTCGGCAATCACAGCACACATGCCGCCGCGCAACGCCAGCTCGCGCCACTGCATGCGCTGAGCCAGGTCGTG
CAGGACGTGCAATTCACCCTGCGACAATTGCGTCGTGCTCCCATGCTCGTTGCGGGCGTGATCGGCACATTTGCCATTGG
GATCGGTGTCTCCACCGCCATCTTCGATCTGCTGGATCGCACCATGCTGCGGCCACCAGCACTGCTGGCGCACGCCGATC
AGATGCATCGCGTGGTGTTTACCGGTGGTGACTACGGGCAACCCTACCCGGGCACCGACTACCGCACCTTTCTCGATCTC
GAGCACGGCACCTCCAGCTTTGCGCAGATGGCGACGTACTGGTCGAGCAGCGGCACGGTGCTCGGCACCGGAGCTGACGC
CGAGGAGCAGCCCGTCGCGGCGTTCAGTGCGGCATTCTGGTCGATGTTCACCATGCGACCGGTGCTGGGCCGCTTCTTCC
GCGTCGACGAAGACCAACCGCCCGCTGGCGAACGTGTGGTGGTGCTGTCTCATGCGTTCTGGCAGACACATTATGGCGGC
CGCTCCGATGTGCTGGGCACCATGCTGCAAGTCGGTACCACGAGCTATCAGATCATCGGCGTGGCACCGCCCTCTTTCCG
CGCGCTGTCTCGCGGCGCCGCGCCCGCGGTGTTTGTGCCACTCAGTACGGTGGGCGCCACCGTGATGGGCCCTGACGATC
CGGGGCGCTGGGCCCGCAGCTATGGCGGTGGATGGTTGACCATCGTGGCGCGTCGCAAGCCGTCGGTGAGCACGGAGCAG
GCTACCTCCGACTTGACACAGGCGTACTTCAAGAGCCGCGCACAATCGATGCAGGAGCTGTCGCGCACGCCGGCTGTCAA
TGAAGTACCAGCGCGTGCCATCGCGGCGCACATGCTGCCCGAGCGCGGTCCACAACGCTCGCGCAATGGCAACATCGTGG
TGTGGTTGGCCGGCGTCGGTGTGGTCATCCTGCTCATTGCCTGCGCGAATGTGGCGCACCTGCTGGTGGTACATGCCGAT
CGACGAGTGCACGAATTTGCCGTGCGCAGTGCGCTGGGAGTGTCACGTTGGCGACTCGCCCAGCAATTGCTCACCGAGAG
CCTCGTATTGTCGCTCGCCGGTGGTGTGGTGGGCAGCGTGATGGCCGCGTGGTCCGGCAACCTGCTGCGTCGTCTCGTAC
TTGGTGTGCCCCGTGATGGCACGGGTCCGTTGGTCGACTGGCGTGTGATGATGGCGGCCGGCGGACTTGCGCTGGCAGCA
GGAGTGCTGGCGGGGTGTTATCCCGCATGGACGGCGCTCACGCGTCCTGTGGCGGTGGGCCTCAAGGCCGGCGCCCGAGC
AGGCAGTCGTGAGTCGTTGTTCACACGACGCGTGTTGCTGGGCCTGCAGGCTGCGTTGTCGGTGATGCTGCTGGTGGGTG
CCTTGCTCTTCGTGCACAGCATGCGACGGGTGCAGGCCTTGCCGCTGGGCTACGATGTCGCGCATTTGCTGTATCTGCGC
CCACAGGAACGTGCGGTATCGCTCTCTGTCGATGAACGGGAGGCGCTGCTCACGCGCCTGATGGATGCCGCGCGCACCAT
TCCCGGCGTCATGCAGGTGTCGCGGATGTCGAGCGTGCCGTTCTGGAATGCGCGCTCACCGCGGGTATTTCGCAGTAGTG
GAGATTCGCTCCCACGCGACTGGCGTGTGGTGCAACAGGCCGCGAGCCCCGGGTATTTCGCTGCCATGGGCACCCCGTTG
TTGCGTGGTCGTGGCATCCTGGAGAGTGATCAGACGGGCAGTGAGCCCGTGGTGGTCGTGAGTGATTCTCTGGCAGCACG
CATGTGGCCTGGACGTGATGCCATTGGCGAATGTCTGCGTGCCGGCTCCGCAGATGCGCCGTGCGCCCGCGTGGTGGGTG
TGGCCGCCGCCATCCGTCGTGATGGCCTGCTCGAAGATGCGGGCAATCAGTACTACATCCCGGCCACGCAGGCACGTCGT
GGTGATGGTGGCATCGTGGTACGTGTCTCGGGAGATGCCGCGGCAAACGCCGAGCAGGTGCGCCGCGCGCTGCAGCCCCT
GTTGCCGGCTGACAGCTATGTCACACCACTGCCGCTCGCGCAGGTGGTGGACCCGTTGTTGCGCTCCTGGCGGGTGAGTG
CGCTGCTCTTTACCACACTGGGAGTGCTGGCGCTGGTATTGGCTTGTGGCGGGTTGTCGGCAATCATCGCGTACGACGTG
ACCCGCCGCGCGCACGAGCTGGCGGTGCGTCTGGCATTGGGCGCGCGCAATCAGGCTATCGTGCGACTGGTGTTCATGGA
CACCATGCGCATCAGCGTACTGGGCGTGGGCATTGGCGTGGCACTGACCATTCTGCTTGCACCATACCTGCAGTCACAAC
TGTTCGAGACACCGGCCCGCGATGTACGAGCCATTCTCATCGCCGCCATCACCTTGCTGGTTGCCGCGGCTGTTGCCGCC
TGGGTGCCGGCCATGCGCGCAGCCCACATTCCACCAGCGCGTGCGCTACGGGAGGGCTGA

Upstream 100 bases:

>100_bases
TCTACACCATCACCGCCAGCGGACGCAAACAGCTCGCGGCGCGGATGGCTGACTATGAACAGGTATCGCTCGCCATCGAG
CGGCTGTTGCAGGCCTGACC

Downstream 100 bases:

>100_bases
TGACGATGACCACATCTCAAACCCTTGGGGCAACGTCTTTGCCGTGCATCGTGCAGCTCGAAGGTATCGGCAAGGTGTTC
GCTACCGACGAGATCGATAC

Product: hypothetical membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>899_residues
MSIFDGWRHRLHVLLNRSAYDEELARERAFHLSLEEMHQRADGHAPPEARAAARRRFGNHSTHAAAQRQLAPLHALSQVV
QDVQFTLRQLRRAPMLVAGVIGTFAIGIGVSTAIFDLLDRTMLRPPALLAHADQMHRVVFTGGDYGQPYPGTDYRTFLDL
EHGTSSFAQMATYWSSSGTVLGTGADAEEQPVAAFSAAFWSMFTMRPVLGRFFRVDEDQPPAGERVVVLSHAFWQTHYGG
RSDVLGTMLQVGTTSYQIIGVAPPSFRALSRGAAPAVFVPLSTVGATVMGPDDPGRWARSYGGGWLTIVARRKPSVSTEQ
ATSDLTQAYFKSRAQSMQELSRTPAVNEVPARAIAAHMLPERGPQRSRNGNIVVWLAGVGVVILLIACANVAHLLVVHAD
RRVHEFAVRSALGVSRWRLAQQLLTESLVLSLAGGVVGSVMAAWSGNLLRRLVLGVPRDGTGPLVDWRVMMAAGGLALAA
GVLAGCYPAWTALTRPVAVGLKAGARAGSRESLFTRRVLLGLQAALSVMLLVGALLFVHSMRRVQALPLGYDVAHLLYLR
PQERAVSLSVDEREALLTRLMDAARTIPGVMQVSRMSSVPFWNARSPRVFRSSGDSLPRDWRVVQQAASPGYFAAMGTPL
LRGRGILESDQTGSEPVVVVSDSLAARMWPGRDAIGECLRAGSADAPCARVVGVAAAIRRDGLLEDAGNQYYIPATQARR
GDGGIVVRVSGDAAANAEQVRRALQPLLPADSYVTPLPLAQVVDPLLRSWRVSALLFTTLGVLALVLACGGLSAIIAYDV
TRRAHELAVRLALGARNQAIVRLVFMDTMRISVLGVGIGVALTILLAPYLQSQLFETPARDVRAILIAAITLLVAAAVAA
WVPAMRAAHIPPARALREG

Sequences:
NA

Specific function: NA

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA