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The map label for this gene is ybhA [C]

Identifier: 226225123

GI number: 226225123

Start: 2624776

End: 2625603

Strand: Reverse

Name: ybhA [C]

Synonym: Lm4b_02544

Alternate gene names: 226225123

Gene position: 2625603-2624776 (Counterclockwise)

Preceding gene: 226225126

Following gene: 226225122

Centisome position: 90.14

GC content: 36.35

Gene sequence:

>828_bases
TTGGCAAATGTAGCGATTGATACAGTTATTACAGATATGGACGGAACATTACTAGTAAAAAAAGGTGATCAAATTCATCC
CCTCAACAAAGAAGTTTTAATGGAATGGCAAAAAAACGGAAAAAAACTTTTCCTTGCAACGGGGCGACTGGATTTAGCAA
TTTTACCATTTATCCACGAGCTCAATATCAAAACGCCAGTCATTTCTTGTAATGGCGGATTAGTACGCGATTTTACTACT
GGAGAGATTTTATATAAAAGTAATATTGAACTGGATTTGATACATACGGTATTAGAAACGCTTGAACCGCTGGACGTTAA
TTATCATATTTATACAACGGAGCGAATTCTCGGACCAACCAATACAGGCAAAATCGCCTTTTTCAACGAATTAAATAAAA
CTTTACCGGAAAATGAACAAGTTCCAATTACTTTAACTACGGATCCATTCAGCGTGCTTCGGGAAGGTGAATTCCCACTA
AAAGTACTCGTAATTGAATCAGATTTAGAAAAACGAGCAGAAATCAAAGCAGCTTTAGAAGGCTTGCCACTTTCTGTTCT
TGCGTCTGCCTCGAATTTAATTGATATTATGAATGAAGGAATTGATAAGGCAAAAGGTCTCACTTATCTTGCGGAAAATG
GTTACATTAATCTTGATTCAACAATTGCTTTTGGGGATAATGAAAATGATGTCGGTATGATTGAATTAGCCGAAATTGGT
GTAGCAATGGAGAATGGCATTCCGCTAGCTTTAGAAAAAGCAGATAAAATCGCAAAGCATCATGATATCGGCGGGCTAGG
GTTATTTATGCAAGAAGAAATTTTATAA

Upstream 100 bases:

>100_bases
CATTCCCATTTAGTATACCAAATATCGGCGTGACAATCATGCGAAACTCGTCTATAATCGAGGTACATAATAACGGAAAT
TTAGAAGGGTGCGAAAACTA

Downstream 100 bases:

>100_bases
GAAAAAGAACTATTAGATATTATTTCACTAATGTACTGACATAAAAAAATGAGAATGGAATAAAAATCACTTAAATTAGG
CTGCTTGTTTCCTGAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MANVAIDTVITDMDGTLLVKKGDQIHPLNKEVLMEWQKNGKKLFLATGRLDLAILPFIHELNIKTPVISCNGGLVRDFTT
GEILYKSNIELDLIHTVLETLEPLDVNYHIYTTERILGPTNTGKIAFFNELNKTLPENEQVPITLTTDPFSVLREGEFPL
KVLVIESDLEKRAEIKAALEGLPLSVLASASNLIDIMNEGIDKAKGLTYLAENGYINLDSTIAFGDNENDVGMIELAEIG
VAMENGIPLALEKADKIAKHHDIGGLGLFMQEEIL

Sequences:

>Translated_275_residues
MANVAIDTVITDMDGTLLVKKGDQIHPLNKEVLMEWQKNGKKLFLATGRLDLAILPFIHELNIKTPVISCNGGLVRDFTT
GEILYKSNIELDLIHTVLETLEPLDVNYHIYTTERILGPTNTGKIAFFNELNKTLPENEQVPITLTTDPFSVLREGEFPL
KVLVIESDLEKRAEIKAALEGLPLSVLASASNLIDIMNEGIDKAKGLTYLAENGYINLDSTIAFGDNENDVGMIELAEIG
VAMENGIPLALEKADKIAKHHDIGGLGLFMQEEIL
>Mature_274_residues
ANVAIDTVITDMDGTLLVKKGDQIHPLNKEVLMEWQKNGKKLFLATGRLDLAILPFIHELNIKTPVISCNGGLVRDFTTG
EILYKSNIELDLIHTVLETLEPLDVNYHIYTTERILGPTNTGKIAFFNELNKTLPENEQVPITLTTDPFSVLREGEFPLK
VLVIESDLEKRAEIKAALEGLPLSVLASASNLIDIMNEGIDKAKGLTYLAENGYINLDSTIAFGDNENDVGMIELAEIGV
AMENGIPLALEKADKIAKHHDIGGLGLFMQEEIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=236, Percent_Identity=28.3898305084746, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367265, Length=281, Percent_Identity=27.7580071174377, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30276; Mature: 30145

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVAIDTVITDMDGTLLVKKGDQIHPLNKEVLMEWQKNGKKLFLATGRLDLAILPFIHE
CCCEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEECHHEE
LNIKTPVISCNGGLVRDFTTGEILYKSNIELDLIHTVLETLEPLDVNYHIYTTERILGPT
CCCCCCEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCC
NTGKIAFFNELNKTLPENEQVPITLTTDPFSVLREGEFPLKVLVIESDLEKRAEIKAALE
CCCCEEEEEHHHHHCCCCCCEEEEEECCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC
GLPLSVLASASNLIDIMNEGIDKAKGLTYLAENGYINLDSTIAFGDNENDVGMIELAEIG
CCCHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCEEEECCEEEECCCCCCCEEEEEEEEC
VAMENGIPLALEKADKIAKHHDIGGLGLFMQEEIL
EEECCCCCEEEHHHHHHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure 
ANVAIDTVITDMDGTLLVKKGDQIHPLNKEVLMEWQKNGKKLFLATGRLDLAILPFIHE
CCEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEECHHEE
LNIKTPVISCNGGLVRDFTTGEILYKSNIELDLIHTVLETLEPLDVNYHIYTTERILGPT
CCCCCCEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCC
NTGKIAFFNELNKTLPENEQVPITLTTDPFSVLREGEFPLKVLVIESDLEKRAEIKAALE
CCCCEEEEEHHHHHCCCCCCEEEEEECCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC
GLPLSVLASASNLIDIMNEGIDKAKGLTYLAENGYINLDSTIAFGDNENDVGMIELAEIG
CCCHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCEEEECCEEEECCCCCCCEEEEEEEEC
VAMENGIPLALEKADKIAKHHDIGGLGLFMQEEIL
EEECCCCCEEEHHHHHHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]