| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is yfhA [H]
Identifier: 226224977
GI number: 226224977
Start: 2470621
End: 2471631
Strand: Reverse
Name: yfhA [H]
Synonym: Lm4b_02398
Alternate gene names: 226224977
Gene position: 2471631-2470621 (Counterclockwise)
Preceding gene: 226224978
Following gene: 226224976
Centisome position: 84.86
GC content: 45.2
Gene sequence:
>1011_bases ATGACAACTGTGAAGGCGCATGATCCGCGGCGAAAACGTAGACGGATAACTTTTATTGTAGTAATCATTTTACTTATTTT AGCTTTTTTCTACGGACTGACAACGGGGTCCGTGAAAATTACATATAGTGATGCTTGGCAGACGCTAACTGGCGGGGGAA GTGACCTAGCGAACCAATTGATTTGGAACTTGCGCTTGCCGCGGTTATTAATTGCTTTCTTAGTAGGAGCAGCGCTGGCG ATTGCTGGATGCTTGCTGCAAGGCGTGATGCGGAATCCATTAGCTGACCCAGGCGTAATTGGGGTTTCAGCCGGTGGTGG CTTCGTGGCCATTTTAATGACATTAGCATTTCCTGCGTTAGCTTCCTTTGTGCCGATTGGTGCGTTTTTAGGGGCGTTTG GAACAGCTATTTTGATTTATTTGCTTGCATGGGATCGCGGTGTTTCTCCTTTACGTGTAATTTTGTCTGGGGTGGCGATT AATGCGTTTATTGGTGCGATGACGTCTGGCGTAATGGTGCTTTATAGCAACCGGGTTCAAAGTGTTATTTCTTGGATGAC AGGGACACTTTCCGGAAAAAGTTGGTATCATTTGGATATGATTTGGCCGTATATGCTGGTCGGGTTTGTTTTAAGTGGTT TTGCGATTCGTTCTTCTAATGTATTGCTACTTGGGGATGATGCGGCGAAATTACTTGGCTTTTCTGTGGAACGGCATCGC TTTTTTATTATAATGTTGGCGGCCTTTCTCAGTGGGGTTGCGGTTAGTGTAGCTGGACTTATTGGCTTTGTTGGACTTGT TGTGCCACATATTTTCCGTTTGATCATTGGAAATGACTATAAATACTTACTGCCACTATCCGCACTCGGCGGGGCTTTAT TAGTTGGCTTTGCTGATACAGCAGCTAGAAGTTGGTTCGGATCCATCGAGCTTCCTGTTGGAATCCTACTTGCAATGATA GGCGCACCATTCTTCTTATTCTTACTTCAAAGAGGGAGGGTTGCTTCATGA
Upstream 100 bases:
>100_bases TTGTCGTACTTCCTGCAGAGCTATTCGGAACAAATCCTGGAATTAAGATTGATCAAGCATTGGATTATATGACAGATGAG ATAAATAAGGTGGATAACTA
Downstream 100 bases:
>100_bases AATCAGCATTAGAACTAAAAAATGTTTCTTTCTCACGTAAAAGAGATTTCGAAATGAAAAACGTGAGCGCGAGTATTCCA GAAGGGAAAATCACTACGCT
Product: ferrichrome ABC transporter (permease) FhuG
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTTVKAHDPRRKRRRITFIVVIILLILAFFYGLTTGSVKITYSDAWQTLTGGGSDLANQLIWNLRLPRLLIAFLVGAALA IAGCLLQGVMRNPLADPGVIGVSAGGGFVAILMTLAFPALASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAI NAFIGAMTSGVMVLYSNRVQSVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRSSNVLLLGDDAAKLLGFSVERHR FFIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLIIGNDYKYLLPLSALGGALLVGFADTAARSWFGSIELPVGILLAMI GAPFFLFLLQRGRVAS
Sequences:
>Translated_336_residues MTTVKAHDPRRKRRRITFIVVIILLILAFFYGLTTGSVKITYSDAWQTLTGGGSDLANQLIWNLRLPRLLIAFLVGAALA IAGCLLQGVMRNPLADPGVIGVSAGGGFVAILMTLAFPALASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAI NAFIGAMTSGVMVLYSNRVQSVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRSSNVLLLGDDAAKLLGFSVERHR FFIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLIIGNDYKYLLPLSALGGALLVGFADTAARSWFGSIELPVGILLAMI GAPFFLFLLQRGRVAS >Mature_335_residues TTVKAHDPRRKRRRITFIVVIILLILAFFYGLTTGSVKITYSDAWQTLTGGGSDLANQLIWNLRLPRLLIAFLVGAALAI AGCLLQGVMRNPLADPGVIGVSAGGGFVAILMTLAFPALASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAIN AFIGAMTSGVMVLYSNRVQSVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRSSNVLLLGDDAAKLLGFSVERHRF FIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLIIGNDYKYLLPLSALGGALLVGFADTAARSWFGSIELPVGILLAMIG APFFLFLLQRGRVAS
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790740, Length=270, Percent_Identity=42.2222222222222, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI1790741, Length=322, Percent_Identity=33.2298136645963, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1786804, Length=326, Percent_Identity=31.5950920245399, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1788004, Length=280, Percent_Identity=37.5, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1786805, Length=299, Percent_Identity=32.1070234113712, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1786347, Length=317, Percent_Identity=31.5457413249211, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35927; Mature: 35795
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVKAHDPRRKRRRITFIVVIILLILAFFYGLTTGSVKITYSDAWQTLTGGGSDLANQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCHHHHHHH IWNLRLPRLLIAFLVGAALAIAGCLLQGVMRNPLADPGVIGVSAGGGFVAILMTLAFPAL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHH ASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAINAFIGAMTSGVMVLYSNRVQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRSSNVLLLGDDAAKLLGFSVERHR HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCEEECCCEEEECCCHHHHHCCHHHHHH FFIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLIIGNDYKYLLPLSALGGALLVGFADT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCHHHHHHHHHH AARSWFGSIELPVGILLAMIGAPFFLFLLQRGRVAS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTVKAHDPRRKRRRITFIVVIILLILAFFYGLTTGSVKITYSDAWQTLTGGGSDLANQL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCHHHHHHH IWNLRLPRLLIAFLVGAALAIAGCLLQGVMRNPLADPGVIGVSAGGGFVAILMTLAFPAL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHH ASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAINAFIGAMTSGVMVLYSNRVQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRSSNVLLLGDDAAKLLGFSVERHR HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCEEECCCEEEECCCHHHHHCCHHHHHH FFIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLIIGNDYKYLLPLSALGGALLVGFADT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCHHHHHHHHHH AARSWFGSIELPVGILLAMIGAPFFLFLLQRGRVAS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]