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The map label for this gene is licB [H]

Identifier: 226224923

GI number: 226224923

Start: 2420208

End: 2420522

Strand: Reverse

Name: licB [H]

Synonym: Lm4b_02343

Alternate gene names: 226224923

Gene position: 2420522-2420208 (Counterclockwise)

Preceding gene: 226224925

Following gene: 226224919

Centisome position: 83.1

GC content: 38.41

Gene sequence:

>315_bases
ATGAAAAATATTGTTTTAGTATGTGCGGCAGGGATGTCAACAAGCCTTTTAGTAACAAAAATGCGTAAAGCAGCAGAAGA
ACGCGGAGAAACTTGTGAAATTGAAGCTTACTCCATTGCTGAAGTAAGTAACTTAATTGACGATGCAGATGTTGTACTTT
TAGGACCACAAGTGCGTTACCAGAAAAAAACAGTTGATGAACTAGCTGCTGGGAAAATTCCAGTAGATGTAATCGACATG
GCAGCTTACGGTACGATGAACGGTGAAAAAGTACTAGGTCAAGCATTAGACTTAATCAACGGTTTCCAAAAATAA

Upstream 100 bases:

>100_bases
TTTTCTCTCGACTCCGGTAGTTTACTTGTTTAAAAAGCTAAAGGTAGTTATAATAAGAGTGTACAAAAAAAGCAGCCTTA
ATCTGAAAGGAAAGATTACG

Downstream 100 bases:

>100_bases
ACAATAAAAAAACCTGTGTGGCACTTAAGCCACGCAGGTTTTTTAGCTTTCTTGGGTAAGTATTCCGTCTTCCATACGAT
ACACATGGTTGACTAAATCT

Product: phosphotransferase system (PTS) beta-glucoside-specific enzyme IIB component

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSNLIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDM
AAYGTMNGEKVLGQALDLINGFQK

Sequences:

>Translated_104_residues
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSNLIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDM
AAYGTMNGEKVLGQALDLINGFQK
>Mature_104_residues
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSNLIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDM
AAYGTMNGEKVLGQALDLINGFQK

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=91, Percent_Identity=47.2527472527472, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 11190; Mature: 11190

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSNLIDDADVVLLGPQVRY
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHCCCCCEEEECCCCHH
QKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
HHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSNLIDDADVVLLGPQVRY
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHCCCCCEEEECCCCHH
QKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
HHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]