Click here to switch to the map view.

The map label for this gene is 226224918

Identifier: 226224918

GI number: 226224918

Start: 2416015

End: 2416422

Strand: Reverse

Name: 226224918

Synonym: Lm4b_02338

Alternate gene names: NA

Gene position: 2416422-2416015 (Counterclockwise)

Preceding gene: 226224919

Following gene: 226224917

Centisome position: 82.96

GC content: 40.2

Gene sequence:

>408_bases
GTGAAAAGATCTATTCATGTGCAGGCATTTGTATATAACGAAAAGAAAGACGAGATACTAGTGGTGAGAGATCGCAATTT
GACATGGGCATTTCCAGGGGGACATGTGGAAACAAACCAAACAATGGAAGAAGCACTTGCAAGCAAAGTGAAAGAGCAGA
CAAATATCGATATAGAAATAGAGTCTATCCTACACTGCAAAGAGCGCCGTGCTACATGGGAGCATGTTTGTACATTCGTT
TTTCGAGCAAAACCTGTTGGTAATGCACTTCTTGCTTCCAATGATGACAATGTGTTTCGAGTGAAGTGGATACCTATCCC
GCTCGCAGATGATTTATTAGCTGTAGACCAATTATCATTAAATGAACTAGTAAGAAGCGAAGGCGTCTTGTATGAAAACT
ATACCTAA

Upstream 100 bases:

>100_bases
AGCTGGTAAATTTAATTGACTAAAATTTTAGAAAAAGGGAATAGTTAGTAGTAATTTTCTATTTATTCAATATTATAAAA
TAGTCAAAAGGGGGATTTAC

Downstream 100 bases:

>100_bases
ATTTCAAAAAGGCTCAAATTTCACAAGGTCAAGCCTTGCTAAAAAGCACTGATTGATATAAAGTTAATAAAGAAACTTTT
TTAAAATTTGGAGGGAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NUDIX Hydrolase; Phosphohydrolase; Hydrolase NUDIX Family

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKRSIHVQAFVYNEKKDEILVVRDRNLTWAFPGGHVETNQTMEEALASKVKEQTNIDIEIESILHCKERRATWEHVCTFV
FRAKPVGNALLASNDDNVFRVKWIPIPLADDLLAVDQLSLNELVRSEGVLYENYT

Sequences:

>Translated_135_residues
MKRSIHVQAFVYNEKKDEILVVRDRNLTWAFPGGHVETNQTMEEALASKVKEQTNIDIEIESILHCKERRATWEHVCTFV
FRAKPVGNALLASNDDNVFRVKWIPIPLADDLLAVDQLSLNELVRSEGVLYENYT
>Mature_135_residues
MKRSIHVQAFVYNEKKDEILVVRDRNLTWAFPGGHVETNQTMEEALASKVKEQTNIDIEIESILHCKERRATWEHVCTFV
FRAKPVGNALLASNDDNVFRVKWIPIPLADDLLAVDQLSLNELVRSEGVLYENYT

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15555; Mature: 15555

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSIHVQAFVYNEKKDEILVVRDRNLTWAFPGGHVETNQTMEEALASKVKEQTNIDIEI
CCCEEEEEEEEEECCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEH
ESILHCKERRATWEHVCTFVFRAKPVGNALLASNDDNVFRVKWIPIPLADDLLAVDQLSL
HHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHH
NELVRSEGVLYENYT
HHHHHHCCEEEECCC
>Mature Secondary Structure
MKRSIHVQAFVYNEKKDEILVVRDRNLTWAFPGGHVETNQTMEEALASKVKEQTNIDIEI
CCCEEEEEEEEEECCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEH
ESILHCKERRATWEHVCTFVFRAKPVGNALLASNDDNVFRVKWIPIPLADDLLAVDQLSL
HHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHH
NELVRSEGVLYENYT
HHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA