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The map label for this gene is ytcJ [H]

Identifier: 226224899

GI number: 226224899

Start: 2386041

End: 2387639

Strand: Reverse

Name: ytcJ [H]

Synonym: Lm4b_02318

Alternate gene names: 226224899

Gene position: 2387639-2386041 (Counterclockwise)

Preceding gene: 226224900

Following gene: 226224898

Centisome position: 81.97

GC content: 42.28

Gene sequence:

>1599_bases
ATGAAATTATGGAAAAATGCTACCTTTTACCAAATGACAGCTGAAGGGGATCAAGTTTCTGCGGTATTAACAGAAAACGG
TCATATTTATGCGGTTGGAGAAGCACGAGAACTAGAAAAACAATATGCGGCTAATATTACCGAAACGATTGATTTAGAAG
AGAAAGTGGTATTTCCTGGGTTCGTTGATGCGCATATTCACTTACTTTGGTATGGACAAGCTTTAGAACGTCTTAATTTA
AACCAAACCACTACTAAAAAAGAGGCACTAGCCCTGATTGCTGAAAGAACAAAGCAACTTGCTAGTGATGAATGGTTGTT
TGTGGAAGGTTATGATGAAAATAAATGGTCAGATGAGCAAACGTTGATTTCTTTGGCCGATTTAGATGAAGTAAGCCAGA
CAAATCCGATTTTAGTTCGGCGCATTGATTATCATAGTGTTTCTATTAATTCTGCATTACAAGCGCATATTGCCGATTTT
TCGGAAAATGGTTTTGATGGTGGCGGCGAAATTGTTCGTGATAAAGAGGGAAATTTTACGGGAATTTTAAGAGATAATGC
AACGACTATGGCGATAGATTCTTTCCCTGCAGCAACGCCTTCTGAACTAAGCGCATGGCTTAAAATCGCGATAACTGATC
TGTGGTCGAAAGGCATAACGGGTGCACACTCGGAAGATTTACATTATTTCACGGGATTCACTTCGACTTTAGCTGCTTTT
CGAAATACTATTGGTGCTAATAAAATGCCGTTTCGTGCGCATTTGCTGGTTCACCACGCAGAACTAGCTGCTTTTTCGGC
TTCTAATGAAAGTTTCGTAAGTGGGGATGCCTTTTTAGAATTAGGGGCGATGAAAATTTTCTATGATGGAACAGTTGGCT
CGCGAACGGCGTTGATGAGTGCGGGATATGCGGACAACCTTGATGAAAAAGGATTGCAAATTCATTCTGATCAAGCGTTT
GAAGATTTGGTTAATGCGGCGCGAAAAGCAGGATTACCTGTTGCTATTCATATTTTAGGGGATCAAGCCTTTGCTAATGT
TATTCGAACGTTACGTGCCAATCCGCCTAGAGAAGGGCAATACGACAGACTAATCCACACACCTTGGCTTACAGAAGCGC
TAATAGAAGAAGCGGCCGGGTTACCTGTGCTATTTGATATACAGCCACAATTCATGGCGAGTGATCTTCCTTGGGCACTA
GAAGTACTTGGAGAAAATCATCCACCGCTAGCTTTTGCTTGGAAAACGCTTCTACAGGCTGGTTTCCCACTAGCTGGAGG
AAGCGATGCGCCGATTGAAGTGCCGAATCCGTTTTGGGGTATCCATGCGGCTGTTACTAGAACGGCGAATGCAGATTTGG
ATGGAGTAGAATATTGGCCAGAGCAGGCACTCACTGTATTTGAAGCGATTCAACTATATACAAAAGGCGCGGCATTTGCG
GGCTACAAAACAACTACACGCGGACAAATTGCACCAGGTTTTGTTGCTGATTTTACGATTTTGGCAGAAGATCCATTTCA
AATGAAACAAGCAGACCTTCGTCAAGTGAGCGTTATGATGACAGTTGTAGACGAACAAATTGTCTATCAGAAGAAGTAA

Upstream 100 bases:

>100_bases
ATGCGCATTAATTAGTATTACACTACAACAAATTTTACAGAAAAAGGACCAACAAGATAAAGCAGCTTTGAAAATTTCCG
TCAATCAGGGGGAATAAAAA

Downstream 100 bases:

>100_bases
AAATAGCTAGGAAACTCCATACAGAGACGGATGTTTCTGAAAAGTTTTTTTGCTAATATGGGAACGGAAGAAATGCCACG
CTTCTGACTCAGTGGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKLWKNATFYQMTAEGDQVSAVLTENGHIYAVGEARELEKQYAANITETIDLEEKVVFPGFVDAHIHLLWYGQALERLNL
NQTTTKKEALALIAERTKQLASDEWLFVEGYDENKWSDEQTLISLADLDEVSQTNPILVRRIDYHSVSINSALQAHIADF
SENGFDGGGEIVRDKEGNFTGILRDNATTMAIDSFPAATPSELSAWLKIAITDLWSKGITGAHSEDLHYFTGFTSTLAAF
RNTIGANKMPFRAHLLVHHAELAAFSASNESFVSGDAFLELGAMKIFYDGTVGSRTALMSAGYADNLDEKGLQIHSDQAF
EDLVNAARKAGLPVAIHILGDQAFANVIRTLRANPPREGQYDRLIHTPWLTEALIEEAAGLPVLFDIQPQFMASDLPWAL
EVLGENHPPLAFAWKTLLQAGFPLAGGSDAPIEVPNPFWGIHAAVTRTANADLDGVEYWPEQALTVFEAIQLYTKGAAFA
GYKTTTRGQIAPGFVADFTILAEDPFQMKQADLRQVSVMMTVVDEQIVYQKK

Sequences:

>Translated_532_residues
MKLWKNATFYQMTAEGDQVSAVLTENGHIYAVGEARELEKQYAANITETIDLEEKVVFPGFVDAHIHLLWYGQALERLNL
NQTTTKKEALALIAERTKQLASDEWLFVEGYDENKWSDEQTLISLADLDEVSQTNPILVRRIDYHSVSINSALQAHIADF
SENGFDGGGEIVRDKEGNFTGILRDNATTMAIDSFPAATPSELSAWLKIAITDLWSKGITGAHSEDLHYFTGFTSTLAAF
RNTIGANKMPFRAHLLVHHAELAAFSASNESFVSGDAFLELGAMKIFYDGTVGSRTALMSAGYADNLDEKGLQIHSDQAF
EDLVNAARKAGLPVAIHILGDQAFANVIRTLRANPPREGQYDRLIHTPWLTEALIEEAAGLPVLFDIQPQFMASDLPWAL
EVLGENHPPLAFAWKTLLQAGFPLAGGSDAPIEVPNPFWGIHAAVTRTANADLDGVEYWPEQALTVFEAIQLYTKGAAFA
GYKTTTRGQIAPGFVADFTILAEDPFQMKQADLRQVSVMMTVVDEQIVYQKK
>Mature_532_residues
MKLWKNATFYQMTAEGDQVSAVLTENGHIYAVGEARELEKQYAANITETIDLEEKVVFPGFVDAHIHLLWYGQALERLNL
NQTTTKKEALALIAERTKQLASDEWLFVEGYDENKWSDEQTLISLADLDEVSQTNPILVRRIDYHSVSINSALQAHIADF
SENGFDGGGEIVRDKEGNFTGILRDNATTMAIDSFPAATPSELSAWLKIAITDLWSKGITGAHSEDLHYFTGFTSTLAAF
RNTIGANKMPFRAHLLVHHAELAAFSASNESFVSGDAFLELGAMKIFYDGTVGSRTALMSAGYADNLDEKGLQIHSDQAF
EDLVNAARKAGLPVAIHILGDQAFANVIRTLRANPPREGQYDRLIHTPWLTEALIEEAAGLPVLFDIQPQFMASDLPWAL
EVLGENHPPLAFAWKTLLQAGFPLAGGSDAPIEVPNPFWGIHAAVTRTANADLDGVEYWPEQALTVFEAIQLYTKGAAFA
GYKTTTRGQIAPGFVADFTILAEDPFQMKQADLRQVSVMMTVVDEQIVYQKK

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 58644; Mature: 58644

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLWKNATFYQMTAEGDQVSAVLTENGHIYAVGEARELEKQYAANITETIDLEEKVVFPG
CCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHCCCHHEECCCCEEECCC
FVDAHIHLLWYGQALERLNLNQTTTKKEALALIAERTKQLASDEWLFVEGYDENKWSDEQ
EECCEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
TLISLADLDEVSQTNPILVRRIDYHSVSINSALQAHIADFSENGFDGGGEIVRDKEGNFT
HEEEHHHHHHHCCCCCEEEEEEECCEEEHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEE
GILRDNATTMAIDSFPAATPSELSAWLKIAITDLWSKGITGAHSEDLHYFTGFTSTLAAF
EEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH
RNTIGANKMPFRAHLLVHHAELAAFSASNESFVSGDAFLELGAMKIFYDGTVGSRTALMS
HHHCCCCCCCCEEEHEEEHHHHHEECCCCCCEECCCHHEEECCEEEEECCCCCCCHHHEE
AGYADNLDEKGLQIHSDQAFEDLVNAARKAGLPVAIHILGDQAFANVIRTLRANPPREGQ
CCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCC
YDRLIHTPWLTEALIEEAAGLPVLFDIQPQFMASDLPWALEVLGENHPPLAFAWKTLLQA
CCCEEECCHHHHHHHHHHCCCCEEEECCHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHC
GFPLAGGSDAPIEVPNPFWGIHAAVTRTANADLDGVEYWPEQALTVFEAIQLYTKGAAFA
CCCCCCCCCCCEECCCCCCCHHHHHEECCCCCCCCHHHCHHHHHHHHHHHHHHHCCCEEC
GYKTTTRGQIAPGFVADFTILAEDPFQMKQADLRQVSVMMTVVDEQIVYQKK
CCCCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLWKNATFYQMTAEGDQVSAVLTENGHIYAVGEARELEKQYAANITETIDLEEKVVFPG
CCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHCCCHHEECCCCEEECCC
FVDAHIHLLWYGQALERLNLNQTTTKKEALALIAERTKQLASDEWLFVEGYDENKWSDEQ
EECCEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
TLISLADLDEVSQTNPILVRRIDYHSVSINSALQAHIADFSENGFDGGGEIVRDKEGNFT
HEEEHHHHHHHCCCCCEEEEEEECCEEEHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEE
GILRDNATTMAIDSFPAATPSELSAWLKIAITDLWSKGITGAHSEDLHYFTGFTSTLAAF
EEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH
RNTIGANKMPFRAHLLVHHAELAAFSASNESFVSGDAFLELGAMKIFYDGTVGSRTALMS
HHHCCCCCCCCEEEHEEEHHHHHEECCCCCCEECCCHHEEECCEEEEECCCCCCCHHHEE
AGYADNLDEKGLQIHSDQAFEDLVNAARKAGLPVAIHILGDQAFANVIRTLRANPPREGQ
CCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCC
YDRLIHTPWLTEALIEEAAGLPVLFDIQPQFMASDLPWALEVLGENHPPLAFAWKTLLQA
CCCEEECCHHHHHHHHHHCCCCEEEECCHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHC
GFPLAGGSDAPIEVPNPFWGIHAAVTRTANADLDGVEYWPEQALTVFEAIQLYTKGAAFA
CCCCCCCCCCCEECCCCCCCHHHHHEECCCCCCCCHHHCHHHHHHHHHHHHHHHCCCEEC
GYKTTTRGQIAPGFVADFTILAEDPFQMKQADLRQVSVMMTVVDEQIVYQKK
CCCCCCCCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]