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The map label for this gene is yhbO [C]

Identifier: 226224864

GI number: 226224864

Start: 2351516

End: 2352037

Strand: Reverse

Name: yhbO [C]

Synonym: Lm4b_02283

Alternate gene names: 226224864

Gene position: 2352037-2351516 (Counterclockwise)

Preceding gene: 226224865

Following gene: 226224861

Centisome position: 80.75

GC content: 42.34

Gene sequence:

>522_bases
ATGACTTTAAAAGGTAAAAAAGTTATTGCACTTGTCAGTGAAGACTTTGAGGATTTAGAGCTTTGGTATCCAGTGCTTAG
ATTGCGCGAGGCAGGAGCTTCGGTGCATCTAGTGGCTGAGGAAGCAAAGAAAGTTTATCACGGTAAGTACGGAGTTCCTG
TTACTTCTGACTATGATTTTGATTCTGTTCGCGCAGAAGATTATGATGGGATTTTAGTTCCAGGTGGCTGGTCCCCAGAC
AAATTACGCCGTTTTGATAGCGTACTAAATTTGGTTCGTGCGTTTGATAAGGCGAAAAAACCAATTGGACAAATTTGCCA
TGCTGGATGGGTACTTGTTTCGGCTGGTATTTTAGAAGGCGTGAATGTAACAAGTACACCGGGAATTAAAGATGATATGA
CGAATGCGGGAGCTATTTGGCATAACGAGCCTGTTGTAACAGACGGCCATATTATTTCGAGTCGTCGCCCACCAGACCTT
CCAGAATATTTACCAGCATTTATTTCCGCTTTAGAAGATTAA

Upstream 100 bases:

>100_bases
TTTATTTCGAGCGTCTTTTTTTGTCTTCTTTTATAGGCGGAATAATTTAATAACAATCTAGTTATTGTTATACTGTAGAA
GAGGATAGGAGGAGATTTAT

Downstream 100 bases:

>100_bases
AAAAAGAAGCATTTCCATATTTTGGGAATGCTTCTTTTTAGTTTAAAAGTAAAAAGTTACGATAAAGCCGATAAAACTAG
GAATTGCAGCAACTAAAAGC

Product: intracellular protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTLKGKKVIALVSEDFEDLELWYPVLRLREAGASVHLVAEEAKKVYHGKYGVPVTSDYDFDSVRAEDYDGILVPGGWSPD
KLRRFDSVLNLVRAFDKAKKPIGQICHAGWVLVSAGILEGVNVTSTPGIKDDMTNAGAIWHNEPVVTDGHIISSRRPPDL
PEYLPAFISALED

Sequences:

>Translated_173_residues
MTLKGKKVIALVSEDFEDLELWYPVLRLREAGASVHLVAEEAKKVYHGKYGVPVTSDYDFDSVRAEDYDGILVPGGWSPD
KLRRFDSVLNLVRAFDKAKKPIGQICHAGWVLVSAGILEGVNVTSTPGIKDDMTNAGAIWHNEPVVTDGHIISSRRPPDL
PEYLPAFISALED
>Mature_172_residues
TLKGKKVIALVSEDFEDLELWYPVLRLREAGASVHLVAEEAKKVYHGKYGVPVTSDYDFDSVRAEDYDGILVPGGWSPDK
LRRFDSVLNLVRAFDKAKKPIGQICHAGWVLVSAGILEGVNVTSTPGIKDDMTNAGAIWHNEPVVTDGHIISSRRPPDLP
EYLPAFISALED

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=160, Percent_Identity=36.875, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19073; Mature: 18942

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKGKKVIALVSEDFEDLELWYPVLRLREAGASVHLVAEEAKKVYHGKYGVPVTSDYDF
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCCC
DSVRAEDYDGILVPGGWSPDKLRRFDSVLNLVRAFDKAKKPIGQICHAGWVLVSAGILEG
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VNVTSTPGIKDDMTNAGAIWHNEPVVTDGHIISSRRPPDLPEYLPAFISALED
CCCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLKGKKVIALVSEDFEDLELWYPVLRLREAGASVHLVAEEAKKVYHGKYGVPVTSDYDF
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCCC
DSVRAEDYDGILVPGGWSPDKLRRFDSVLNLVRAFDKAKKPIGQICHAGWVLVSAGILEG
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VNVTSTPGIKDDMTNAGAIWHNEPVVTDGHIISSRRPPDLPEYLPAFISALED
CCCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]