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The map label for this gene is ydiM [H]

Identifier: 226224846

GI number: 226224846

Start: 2335675

End: 2336865

Strand: Direct

Name: ydiM [H]

Synonym: Lm4b_02265

Alternate gene names: 226224846

Gene position: 2335675-2336865 (Clockwise)

Preceding gene: 226224845

Following gene: 226224851

Centisome position: 80.19

GC content: 37.2

Gene sequence:

>1191_bases
ATGAAAAACAAATATTTATCTACATCACTTGGTCTTTATATGAACTACTTTGTTCATGGTATGGCGTTAATCATCATTGC
ACAAAATATTGATTTTTTATCTCAAAAATGGCATACAGATTTGGCTGGTGCTGCCGGCGTTGTATCTTCCTTTGGGATTG
GTAAATTATTAGCTGTATTTATTTCGGGAAGACTATCCGATAAATTCGGTAGAAAGTTGTCTGTTATTCTCGGCGTGTTT
TTCTATATTATCTTTTTAGGCGGTATATTACTCAGCCCCAATACGATTATCGCATACATGTTTGGTATTTCTGCTGGGAT
AGCAAATTCCTTCTTAGATACAGGAACCTACCCCGCCCTTATGGAAGCTTATCCAAAAAAAGCTGCTTCTGCTAATATCA
TTGTTAAAGCTTTCGTACAATCTGGTCAATTCCTTTTACCATTCATGATTGCATTTATTTTAGCAAATAACTTATGGTAT
GGCTGGAGCTTTATTGTATTGATCGTTATTTTACTAATTAACTTACTCTATACATTAACGCGAACTTTCCCGCCGATGAC
TGTTGGAAAACCACTAGATGCAGCAGAACTTGCCGAAGAGAAAAAGCAAAAGTTTCATTTTAGTATAGATGAAATTTGTT
TGATTTTATTTGGTTTTGTGGCCCAAACGCTTCTTTATATTATGAGCCAATGGATCGCTAAGTATGGTTCAGAAGTTATT
CATATGACAGACGATGCTTCTAGACTACTTGTAAGTTATGCTAGTGTCGGAGCGATTATTTGTGTGTGTGTGACGTTTAT
TTTAGGAAATCGCGGCGTGCGAACGCTCCATATCTTAATTACTTATGTAACCATGACGATGCTCATCTCCTTTACACTGT
TTGCTTTCCCAAGCGAAATCGTATGTATTGTTGGGGCTTTCTTATTGGGCTATTTCTCTGCTGGAGGAATTATCCAATTA
GGTTTAACACTACTTGCGGAGGTTTCTGCTCGAGGAAAGGGTTTTGTCACTAGCCTTTATACTATTGCAGAAGGGATAGC
TGTTTTCATTATCCCCTTGATTGCTGCTGCGATTTCCCGAATTGATATTGCCGCTATCTTCTTACTAAATGCTGGTATTG
CGCTTTTCGGCCTCGCTCTCTTAATGATTGTATTTACAAGAAAGAAAAAATTTGCTCGAGATCATATTTAA

Upstream 100 bases:

>100_bases
AAAGCACAAACTTATGTATTTTATCTATATGAACTCACTGAAAAAGAGGGTATTTTTAATAAAAAGTCCTCATAAGTCAT
TACATAAAGGAGAGCAGACT

Downstream 100 bases:

>100_bases
AAAAGACCGAGAATTGATTCCTCAATTCTCGGTCTTTTTTAATGTTTCCGTAACGTCTTCCATTTGTACATGAGCATCCA
AAAAGCAATAACAGATGCAA

Product: transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGAAGVVSSFGIGKLLAVFISGRLSDKFGRKLSVILGVF
FYIIFLGGILLSPNTIIAYMFGISAGIANSFLDTGTYPALMEAYPKKAASANIIVKAFVQSGQFLLPFMIAFILANNLWY
GWSFIVLIVILLINLLYTLTRTFPPMTVGKPLDAAELAEEKKQKFHFSIDEICLILFGFVAQTLLYIMSQWIAKYGSEVI
HMTDDASRLLVSYASVGAIICVCVTFILGNRGVRTLHILITYVTMTMLISFTLFAFPSEIVCIVGAFLLGYFSAGGIIQL
GLTLLAEVSARGKGFVTSLYTIAEGIAVFIIPLIAAAISRIDIAAIFLLNAGIALFGLALLMIVFTRKKKFARDHI

Sequences:

>Translated_396_residues
MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGAAGVVSSFGIGKLLAVFISGRLSDKFGRKLSVILGVF
FYIIFLGGILLSPNTIIAYMFGISAGIANSFLDTGTYPALMEAYPKKAASANIIVKAFVQSGQFLLPFMIAFILANNLWY
GWSFIVLIVILLINLLYTLTRTFPPMTVGKPLDAAELAEEKKQKFHFSIDEICLILFGFVAQTLLYIMSQWIAKYGSEVI
HMTDDASRLLVSYASVGAIICVCVTFILGNRGVRTLHILITYVTMTMLISFTLFAFPSEIVCIVGAFLLGYFSAGGIIQL
GLTLLAEVSARGKGFVTSLYTIAEGIAVFIIPLIAAAISRIDIAAIFLLNAGIALFGLALLMIVFTRKKKFARDHI
>Mature_396_residues
MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGAAGVVSSFGIGKLLAVFISGRLSDKFGRKLSVILGVF
FYIIFLGGILLSPNTIIAYMFGISAGIANSFLDTGTYPALMEAYPKKAASANIIVKAFVQSGQFLLPFMIAFILANNLWY
GWSFIVLIVILLINLLYTLTRTFPPMTVGKPLDAAELAEEKKQKFHFSIDEICLILFGFVAQTLLYIMSQWIAKYGSEVI
HMTDDASRLLVSYASVGAIICVCVTFILGNRGVRTLHILITYVTMTMLISFTLFAFPSEIVCIVGAFLLGYFSAGGIIQL
GLTLLAEVSARGKGFVTSLYTIAEGIAVFIIPLIAAAISRIDIAAIFLLNAGIALFGLALLMIVFTRKKKFARDHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787981, Length=395, Percent_Identity=42.2784810126582, Blast_Score=307, Evalue=8e-85,
Organism=Escherichia coli, GI226510946, Length=391, Percent_Identity=35.5498721227622, Blast_Score=249, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43328; Mature: 43328

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]