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The map label for this gene is ecsB [H]

Identifier: 226224822

GI number: 226224822

Start: 2309003

End: 2310226

Strand: Reverse

Name: ecsB [H]

Synonym: Lm4b_02241

Alternate gene names: 226224822

Gene position: 2310226-2309003 (Counterclockwise)

Preceding gene: 226224823

Following gene: 226224820

Centisome position: 79.32

GC content: 36.36

Gene sequence:

>1224_bases
ATGAAGATGATATTTGACAGCAAAGCGCTTTGGAAAGAACGTTTTAGTGCTTATACGACCGAAGTCATGCGCTATCTTCG
TTATATGTTTAATGATCATTTGCTTTTTGTGCTTGTGATTGGACTTGGAGCGGGGATTTTTTATTACGCTGGTTGGGTAA
AGACACTTGAACCCACATTTCCCGTTATTCCGTTAATGGTTATTTTACTCACTGCTTCAATTGCCATTAGTCCTGTTGCC
ACGTTGCTGAAAAAACCGGATATTGTTTACTTAATTGTACAGGAAAAAGCAATGGATAGTTATTTTACCCAAGCAAAAAT
AGCGAGCTTCTTTATGCAATTATATGTTTTTGTAATTGTACTTGGGGTTTGTATGCCGATGTATGTGGAAGTGACAAAGG
TTCCGTACAGCCAGTTTTTCACTTTGTTTATTGTCCTCAGTATGCTAAAAGCGTGGAACATTTATTTTGGTTGGGAAAGT
ATGAAATTAGAAGAGGCGGATACAACGTGGATGTTTATTCGTGTTATCCTTAATGCTATTTTAATTTATATTGCGTTAGT
CGCCGCACCTTACATTTCTATTCCTTTGGTTTTGGTAGTACTTGTGGCGAGTTACTACTGGCTTCGAACTAAAACGGCAA
AAGTAACTTTACGCTGGGAATATTTAGTGGATAAAGAAGAAGCGCGGATGAATCGGTTCTATCGTTTAGTGAATCTATTT
ACGGATGTACCTCATTTGCGAGGAACGGTTCGGAGACGGAGTTATCTCGATTTTCTTTATCAGCCAATTCCTTATGCGAA
AAGAAAAACATTTGCTTATTTGTTCAGTCGGACATTTATTAGAACAAATGAATATGCCGGTCTTTACATTAGACTTACCG
TAATTGCCGTGATTTTACTCGTGTTTGTTCAAGGTTTTTATTTAAATATCATTTTCTCACTACTATTTTTGTATTTAACT
GGTTTTCAATTCATCCCGATGTTAAAACATTATGATGCACAAATTATGCTACGACTTTATCCGATTAATGATCGTTATCG
TCATCGCAGTTTTATTCACTTTCTTCGGATTTTGTTACTCGCTCAAGCACTACTCTTTAGTGTGATTGGCATTGCACAAA
ATGGGACCATCAGTGGGATGATCATTTTAGGAATTAATTTGGCTTTTGTAGTTATCTTTACGTTCCTTTATGCACCAGTC
AGAATGAAAAAAATGTACGAATAA

Upstream 100 bases:

>100_bases
CGCGCAGAGGGAACGCTGAAAGACTTGCAAACAAACTTCGAAATGCCGGGAGCTTCACTTGATGAAATTTACATTCAGTT
GACAAAGGAAGAGGAAGCTG

Downstream 100 bases:

>100_bases
AAAAAGCGATTTGGATGAGTGGTCCAAATCGCTTTTTCCTATTTAGCATCATGGGAAAATTCTGGATAATGATAAATATC
TTCATGTGAGAATCCAGATT

Product: ABC transporter (membrane protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKMIFDSKALWKERFSAYTTEVMRYLRYMFNDHLLFVLVIGLGAGIFYYAGWVKTLEPTFPVIPLMVILLTASIAISPVA
TLLKKPDIVYLIVQEKAMDSYFTQAKIASFFMQLYVFVIVLGVCMPMYVEVTKVPYSQFFTLFIVLSMLKAWNIYFGWES
MKLEEADTTWMFIRVILNAILIYIALVAAPYISIPLVLVVLVASYYWLRTKTAKVTLRWEYLVDKEEARMNRFYRLVNLF
TDVPHLRGTVRRRSYLDFLYQPIPYAKRKTFAYLFSRTFIRTNEYAGLYIRLTVIAVILLVFVQGFYLNIIFSLLFLYLT
GFQFIPMLKHYDAQIMLRLYPINDRYRHRSFIHFLRILLLAQALLFSVIGIAQNGTISGMIILGINLAFVVIFTFLYAPV
RMKKMYE

Sequences:

>Translated_407_residues
MKMIFDSKALWKERFSAYTTEVMRYLRYMFNDHLLFVLVIGLGAGIFYYAGWVKTLEPTFPVIPLMVILLTASIAISPVA
TLLKKPDIVYLIVQEKAMDSYFTQAKIASFFMQLYVFVIVLGVCMPMYVEVTKVPYSQFFTLFIVLSMLKAWNIYFGWES
MKLEEADTTWMFIRVILNAILIYIALVAAPYISIPLVLVVLVASYYWLRTKTAKVTLRWEYLVDKEEARMNRFYRLVNLF
TDVPHLRGTVRRRSYLDFLYQPIPYAKRKTFAYLFSRTFIRTNEYAGLYIRLTVIAVILLVFVQGFYLNIIFSLLFLYLT
GFQFIPMLKHYDAQIMLRLYPINDRYRHRSFIHFLRILLLAQALLFSVIGIAQNGTISGMIILGINLAFVVIFTFLYAPV
RMKKMYE
>Mature_407_residues
MKMIFDSKALWKERFSAYTTEVMRYLRYMFNDHLLFVLVIGLGAGIFYYAGWVKTLEPTFPVIPLMVILLTASIAISPVA
TLLKKPDIVYLIVQEKAMDSYFTQAKIASFFMQLYVFVIVLGVCMPMYVEVTKVPYSQFFTLFIVLSMLKAWNIYFGWES
MKLEEADTTWMFIRVILNAILIYIALVAAPYISIPLVLVVLVASYYWLRTKTAKVTLRWEYLVDKEEARMNRFYRLVNLF
TDVPHLRGTVRRRSYLDFLYQPIPYAKRKTFAYLFSRTFIRTNEYAGLYIRLTVIAVILLVFVQGFYLNIIFSLLFLYLT
GFQFIPMLKHYDAQIMLRLYPINDRYRHRSFIHFLRILLLAQALLFSVIGIAQNGTISGMIILGINLAFVVIFTFLYAPV
RMKKMYE

Specific function: Presumed to form part of an ABC-transporter, it may form a transport channel [H]

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010288 [H]

Pfam domain/function: PF05975 EcsB [H]

EC number: NA

Molecular weight: Translated: 47832; Mature: 47832

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMIFDSKALWKERFSAYTTEVMRYLRYMFNDHLLFVLVIGLGAGIFYYAGWVKTLEPTF
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVIPLMVILLTASIAISPVATLLKKPDIVYLIVQEKAMDSYFTQAKIASFFMQLYVFVIV
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVCMPMYVEVTKVPYSQFFTLFIVLSMLKAWNIYFGWESMKLEEADTTWMFIRVILNAI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCHHHHHHHHHHHHH
LIYIALVAAPYISIPLVLVVLVASYYWLRTKTAKVTLRWEYLVDKEEARMNRFYRLVNLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEHHCHHHHHHHHHHHHHHHH
TDVPHLRGTVRRRSYLDFLYQPIPYAKRKTFAYLFSRTFIRTNEYAGLYIRLTVIAVILL
HCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VFVQGFYLNIIFSLLFLYLTGFQFIPMLKHYDAQIMLRLYPINDRYRHRSFIHFLRILLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
AQALLFSVIGIAQNGTISGMIILGINLAFVVIFTFLYAPVRMKKMYE
HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMIFDSKALWKERFSAYTTEVMRYLRYMFNDHLLFVLVIGLGAGIFYYAGWVKTLEPTF
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVIPLMVILLTASIAISPVATLLKKPDIVYLIVQEKAMDSYFTQAKIASFFMQLYVFVIV
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVCMPMYVEVTKVPYSQFFTLFIVLSMLKAWNIYFGWESMKLEEADTTWMFIRVILNAI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCHHHHHHHHHHHHH
LIYIALVAAPYISIPLVLVVLVASYYWLRTKTAKVTLRWEYLVDKEEARMNRFYRLVNLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEHHCHHHHHHHHHHHHHHHH
TDVPHLRGTVRRRSYLDFLYQPIPYAKRKTFAYLFSRTFIRTNEYAGLYIRLTVIAVILL
HCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VFVQGFYLNIIFSLLFLYLTGFQFIPMLKHYDAQIMLRLYPINDRYRHRSFIHFLRILLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
AQALLFSVIGIAQNGTISGMIILGINLAFVVIFTFLYAPVRMKKMYE
HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]