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The map label for this gene is ykrA [H]

Identifier: 226224816

GI number: 226224816

Start: 2304036

End: 2304806

Strand: Reverse

Name: ykrA [H]

Synonym: Lm4b_02235

Alternate gene names: 226224816

Gene position: 2304806-2304036 (Counterclockwise)

Preceding gene: 226224817

Following gene: 226224815

Centisome position: 79.13

GC content: 36.71

Gene sequence:

>771_bases
GTGAAACCACGTGGAATTTGTTTTTTTGATATGGATGGAACACTGTTAAATAGTGAATCCAAAGTACTTGATACCTCGCT
TCAAGCACTTGATAAACTTCGAGAAAATAATGTTATTCCTGTTATTGCTACTGGTCGGACGCTCATAGAAATCAGTCATC
AAATGAAAATTACCGGCATTGAATCCGCAGTAATGATGAACGGACAAATGGCTATCTTTGAAGGAGAAAAAGTGTACGAA
GATGTGATTGATGCTGATTTACTTGCTCGTTTGACGGAAGAAGCTAAATCACAAAATGTAGAGGTTTGCTATTATAATGA
TAAAAGAATTGGCGCAACCGCAAGTACACCTGTTGTAAAAGCACACTATGATTTTTTAGGCGAGCCAATGCCAGAAGTAA
GGCCTAATATGTATAAAGAAGAAAACATCAATATGGCGCTTCTTTTACTCGAAACTGGTGATGATTATTTTCCAGAACGC
TTTCCAGAATTACAATTTATTCGCAACACACCATTTAGTAATGACGTCTTAAGAAATGGCGGATCTAAAGCAGTAGGCAT
TTCGAAGCTACTTGAAGTAATGGGCTATCAAGACGTTCCAACTTATGCGTTTGGTGATGGAATGAACGATTTAGAAATGT
TTGGCGCAGTGGATTATGCCATTGCAATGGAAAATGCCGTACCATTATTAAAAGAAAAAGCTACTTTTGTAACGAAAGAT
AACAATAGTGACGGCATTATGCTTGGCTTGAAACAATTTGATTTAATTTAA

Upstream 100 bases:

>100_bases
TTTTGAGCATACAGGAGATTTTGTTATGTACAAATAGCCTTTACTTTGTATCCGTAAGATTGGTATGATGGATATATTAT
GTTAGTAAAGGATGAATAAT

Downstream 100 bases:

>100_bases
AGAAGTGCCTCGTGCGCTTCTTTTTTTGTGAAATTCCAACGCAAGACCGATAGAATTGTAATAATTCTTTTGATATAATA
AAACTAATCAATTGGAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKPRGICFFDMDGTLLNSESKVLDTSLQALDKLRENNVIPVIATGRTLIEISHQMKITGIESAVMMNGQMAIFEGEKVYE
DVIDADLLARLTEEAKSQNVEVCYYNDKRIGATASTPVVKAHYDFLGEPMPEVRPNMYKEENINMALLLLETGDDYFPER
FPELQFIRNTPFSNDVLRNGGSKAVGISKLLEVMGYQDVPTYAFGDGMNDLEMFGAVDYAIAMENAVPLLKEKATFVTKD
NNSDGIMLGLKQFDLI

Sequences:

>Translated_256_residues
MKPRGICFFDMDGTLLNSESKVLDTSLQALDKLRENNVIPVIATGRTLIEISHQMKITGIESAVMMNGQMAIFEGEKVYE
DVIDADLLARLTEEAKSQNVEVCYYNDKRIGATASTPVVKAHYDFLGEPMPEVRPNMYKEENINMALLLLETGDDYFPER
FPELQFIRNTPFSNDVLRNGGSKAVGISKLLEVMGYQDVPTYAFGDGMNDLEMFGAVDYAIAMENAVPLLKEKATFVTKD
NNSDGIMLGLKQFDLI
>Mature_256_residues
MKPRGICFFDMDGTLLNSESKVLDTSLQALDKLRENNVIPVIATGRTLIEISHQMKITGIESAVMMNGQMAIFEGEKVYE
DVIDADLLARLTEEAKSQNVEVCYYNDKRIGATASTPVVKAHYDFLGEPMPEVRPNMYKEENINMALLLLETGDDYFPER
FPELQFIRNTPFSNDVLRNGGSKAVGISKLLEVMGYQDVPTYAFGDGMNDLEMFGAVDYAIAMENAVPLLKEKATFVTKD
NNSDGIMLGLKQFDLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=267, Percent_Identity=25.8426966292135, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI2367265, Length=269, Percent_Identity=24.5353159851301, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28590; Mature: 28590

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRGICFFDMDGTLLNSESKVLDTSLQALDKLRENNVIPVIATGRTLIEISHQMKITGI
CCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECEEEEEEC
ESAVMMNGQMAIFEGEKVYEDVIDADLLARLTEEAKSQNVEVCYYNDKRIGATASTPVVK
CCEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCEEE
AHYDFLGEPMPEVRPNMYKEENINMALLLLETGDDYFPERFPELQFIRNTPFSNDVLRNG
EEHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCEEEECCCCCCHHHHCC
GSKAVGISKLLEVMGYQDVPTYAFGDGMNDLEMFGAVDYAIAMENAVPLLKEKATFVTKD
CCCCCCHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEC
NNSDGIMLGLKQFDLI
CCCCEEEEEHHHHCCC
>Mature Secondary Structure
MKPRGICFFDMDGTLLNSESKVLDTSLQALDKLRENNVIPVIATGRTLIEISHQMKITGI
CCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECEEEEEEC
ESAVMMNGQMAIFEGEKVYEDVIDADLLARLTEEAKSQNVEVCYYNDKRIGATASTPVVK
CCEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCEEE
AHYDFLGEPMPEVRPNMYKEENINMALLLLETGDDYFPERFPELQFIRNTPFSNDVLRNG
EEHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCEEEECCCCCCHHHHCC
GSKAVGISKLLEVMGYQDVPTYAFGDGMNDLEMFGAVDYAIAMENAVPLLKEKATFVTKD
CCCCCCHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEC
NNSDGIMLGLKQFDLI
CCCCEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]