| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224739
Identifier: 226224739
GI number: 226224739
Start: 2218281
End: 2218991
Strand: Direct
Name: 226224739
Synonym: Lm4b_02156
Alternate gene names: NA
Gene position: 2218281-2218991 (Clockwise)
Preceding gene: 226224734
Following gene: 226224746
Centisome position: 76.16
GC content: 32.77
Gene sequence:
>711_bases ATGTATTTAAAAGAAACGTTAGATCAATTTGCTTCGATAGATAATATTCTTAAACTGCTCAAGAAAAATCCGAGTTTTAA TAAGCACTGCATTCAAGAGCGGCTCCCACAAAAAACAATTATCACATCCAATAAACAACGAAAACATATCTATATAATAG AAGAAGGTTTTATGAAACTAATATTTGATGACAACAAACCGCGTGATTTTTCTTATATTTTGTCTAAAGGAGCATTTCCC TTTTTGCCAGTTTATACAGAGGATATACCTGAACACACAATGATGGTTGCTCTTACAGATATTGTATGGTGGAAAATTGA TATCAGTTTCTTTAAGGGGATGATGGAGACGGAAGATCCGCGAAATTATCTCATGCTTCATCAATTAGCGGAAACTAGAA GAAGATTTTACACTATCGCTTATCAAGAAAAATTGACTTCACGTGAAAGTATTTATTATTCTTTAAGTACAATGATTGAA TTTGGCCTACGTATCTCCGAAAAAATAGTAGAACTTCCAGAATTTTTAACTTATCAAATACTTGCTGATCATGCTAATAC TTCTAAAAGCTACACGTCTAAAGTTCTAGGACATTTACGTGAAGAAGGCATTTTGGAATCACAAAGAAAGCCTTGGCGAA TTAACGATGTCCAGAAGCTCCAAAAGTTAATAGAGATGAATGTACCACTTGTAAAGATACAAAAAAACTAA
Upstream 100 bases:
>100_bases TTTATTCTTCCCCGCTTATGTTTACGCAAAAATATTCTACTAGAAGAATAAGTTTTATGCGCTTATATTGCGGGAAACTA ATGACATAGGGGGGAATGGT
Downstream 100 bases:
>100_bases GAGCCAACTTGCGCTCTTAGTTTTTTTTGTTAGATTAGTTCACTTCGCCAAGCTGTGGTTTTTGCTTGTTGGTATTTTTC AACTTGACCAATAGACTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MYLKETLDQFASIDNILKLLKKNPSFNKHCIQERLPQKTIITSNKQRKHIYIIEEGFMKLIFDDNKPRDFSYILSKGAFP FLPVYTEDIPEHTMMVALTDIVWWKIDISFFKGMMETEDPRNYLMLHQLAETRRRFYTIAYQEKLTSRESIYYSLSTMIE FGLRISEKIVELPEFLTYQILADHANTSKSYTSKVLGHLREEGILESQRKPWRINDVQKLQKLIEMNVPLVKIQKN
Sequences:
>Translated_236_residues MYLKETLDQFASIDNILKLLKKNPSFNKHCIQERLPQKTIITSNKQRKHIYIIEEGFMKLIFDDNKPRDFSYILSKGAFP FLPVYTEDIPEHTMMVALTDIVWWKIDISFFKGMMETEDPRNYLMLHQLAETRRRFYTIAYQEKLTSRESIYYSLSTMIE FGLRISEKIVELPEFLTYQILADHANTSKSYTSKVLGHLREEGILESQRKPWRINDVQKLQKLIEMNVPLVKIQKN >Mature_236_residues MYLKETLDQFASIDNILKLLKKNPSFNKHCIQERLPQKTIITSNKQRKHIYIIEEGFMKLIFDDNKPRDFSYILSKGAFP FLPVYTEDIPEHTMMVALTDIVWWKIDISFFKGMMETEDPRNYLMLHQLAETRRRFYTIAYQEKLTSRESIYYSLSTMIE FGLRISEKIVELPEFLTYQILADHANTSKSYTSKVLGHLREEGILESQRKPWRINDVQKLQKLIEMNVPLVKIQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28079; Mature: 28079
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLKETLDQFASIDNILKLLKKNPSFNKHCIQERLPQKTIITSNKQRKHIYIIEEGFMKL CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEECCCCCCCEEEEEECCCEEE IFDDNKPRDFSYILSKGAFPFLPVYTEDIPEHTMMVALTDIVWWKIDISFFKGMMETEDP EECCCCCCHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHEEEHHHHHHHHCCCCC RNYLMLHQLAETRRRFYTIAYQEKLTSRESIYYSLSTMIEFGLRISEKIVELPEFLTYQI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LADHANTSKSYTSKVLGHLREEGILESQRKPWRINDVQKLQKLIEMNVPLVKIQKN HHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MYLKETLDQFASIDNILKLLKKNPSFNKHCIQERLPQKTIITSNKQRKHIYIIEEGFMKL CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEECCCCCCCEEEEEECCCEEE IFDDNKPRDFSYILSKGAFPFLPVYTEDIPEHTMMVALTDIVWWKIDISFFKGMMETEDP EECCCCCCHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHEEEHHHHHHHHCCCCC RNYLMLHQLAETRRRFYTIAYQEKLTSRESIYYSLSTMIEFGLRISEKIVELPEFLTYQI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LADHANTSKSYTSKVLGHLREEGILESQRKPWRINDVQKLQKLIEMNVPLVKIQKN HHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA