| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224719
Identifier: 226224719
GI number: 226224719
Start: 2192358
End: 2193113
Strand: Direct
Name: 226224719
Synonym: Lm4b_02135
Alternate gene names: NA
Gene position: 2192358-2193113 (Clockwise)
Preceding gene: 226224718
Following gene: 226224720
Centisome position: 75.27
GC content: 40.48
Gene sequence:
>756_bases ATGAATGAAGCAGTAAAAACTTTAGATGGATGGTTTTGTCTACATGATTTTCGTTCGATTGACTGGGCTGCGTGGCGTGA ACTAAATCCAGGTAATCAGGAACTTATGTTAAATGAACTCAGCCACTTTCTAAGCGATATGGAAATTACTAAAAATATCG GTGAAGGTGAACATACCATTTACAGTATTCTTGGTCAAAAAGCAGATTTAGTATTCTTCACTTTGCGTGATTCCCTTGAA GCGCTGAATGAAGTCGAAAATCGTTTTAATAAATTAGCGATTGCCGACTACTTGTTGCCGACTTATTCCTATATATCTGT GGTGGAATTAAGTAACTATCTAGCGTCTCACATGGCGGGCGGCGAAGATCCTTACCAAAACAAAGGTGTTCGCGCGAGAC TCTATCCAGCACTCCCACCTAAAAAGCATATTTGTTTCTACCCAATGAGTAAAAAACGGGACGGCGCTGATAATTGGTAT ATGCTTCCAATGGAAGAACGCCAACAACTTATTCGCGACCATGGCTTGATTGGTAGAAGCTATGCGGGCAAAGTACAACA AATTATCGGTGGTTCCATCGGATTTGACGATTATGAATGGGGCGTCACTTTATTTTCCGATGATGCACTGGAGTTCAAAC GCATCGTAACGGAAATGCGCTTTGATGAAGCAAGCGCTCGATATGCTGAATTTGGTTCTTTCTTTATTGGAAACCTGTTA CCATCCGAGCAACTTTCTAAATTATTTACTATTTAA
Upstream 100 bases:
>100_bases GTCCTTTTGAAACGTAAATTTCACAAACAGCGAAACGGACGAACTACTTCCCGTATGTTACACTTTAGTTAGTGATATTC TAAACAAGGAGTGATACATA
Downstream 100 bases:
>100_bases TATAAGTAAAAACTGGAATTCAATCTAACAAATGACTGATTTTGTTAGCTGGATTCCAGTTTTTTTATTTCACTAAACTA ACAATTTTGTAAGGATATCT
Product: putative heme peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLE ALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY MLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL PSEQLSKLFTI
Sequences:
>Translated_251_residues MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLE ALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY MLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL PSEQLSKLFTI >Mature_251_residues MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLE ALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY MLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL PSEQLSKLFTI
Specific function: Unknown
COG id: COG3253
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0447 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010644 - InterPro: IPR011008 [H]
Pfam domain/function: PF06778 Chlor_dismutase [H]
EC number: NA
Molecular weight: Translated: 28850; Mature: 28850
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTI CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH YSILGQKADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAG HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWYMLPMEERQQLIRDHGLIGRS CCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCH YAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL HHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSEQLSKLFTI CHHHHHHHHCC >Mature Secondary Structure MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTI CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH YSILGQKADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAG HHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWYMLPMEERQQLIRDHGLIGRS CCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCH YAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLL HHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSEQLSKLFTI CHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]