Click here to switch to the map view.

The map label for this gene is 226224548

Identifier: 226224548

GI number: 226224548

Start: 2007283

End: 2007507

Strand: Direct

Name: 226224548

Synonym: Lm4b_01962

Alternate gene names: NA

Gene position: 2007283-2007507 (Clockwise)

Preceding gene: 226224521

Following gene: 226224565

Centisome position: 68.92

GC content: 36.0

Gene sequence:

>225_bases
TTGAAGTATTGTCTTGTCGAAAAAGACACTTGTATTGCTTGTGGCGCTTGTTCCATTCATGCACCTGATGTTTTTGATTA
TGATACAGAAGGTCTTGCCTTTAATATATTAGATAATAACACTGGAACAAAAGTAATCCCCGAAGACTTGGTTGAAACGG
TTATTGACGCAGAATTTGCATGTCCTTCGCTTTCTATCAAAGTTTCCGATAGTTCATTTCATTAA

Upstream 100 bases:

>100_bases
TACATTAATTTTTCCGAAAAAAACTTTTTCAAAATATGGTACAATAGAAAAAGAAAAAATCTGGCTGCAAATAGTTATTT
TAGAAAGGAAGCGTAGAAAA

Downstream 100 bases:

>100_bases
TAATACACGAAAAAGGAAGGTTTCCGCTGTTTGGAAACCTTCCTTTTTTATTTTTAATAAATATTATTTCACTTTTCGTC
TCCTTAGAGCAAATCCCCAT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKYCLVEKDTCIACGACSIHAPDVFDYDTEGLAFNILDNNTGTKVIPEDLVETVIDAEFACPSLSIKVSDSSFH

Sequences:

>Translated_74_residues
MKYCLVEKDTCIACGACSIHAPDVFDYDTEGLAFNILDNNTGTKVIPEDLVETVIDAEFACPSLSIKVSDSSFH
>Mature_74_residues
MKYCLVEKDTCIACGACSIHAPDVFDYDTEGLAFNILDNNTGTKVIPEDLVETVIDAEFACPSLSIKVSDSSFH

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1141

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001080
- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8032; Mature: 8032

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYCLVEKDTCIACGACSIHAPDVFDYDTEGLAFNILDNNTGTKVIPEDLVETVIDAEFA
CCEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHCCCCC
CPSLSIKVSDSSFH
CCCEEEEECCCCCC
>Mature Secondary Structure
MKYCLVEKDTCIACGACSIHAPDVFDYDTEGLAFNILDNNTGTKVIPEDLVETVIDAEFA
CCEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHCCCCC
CPSLSIKVSDSSFH
CCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3351918; 2600971; 11827483 [H]