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The map label for this gene is ydiA [C]

Identifier: 226224469

GI number: 226224469

Start: 1925423

End: 1926235

Strand: Direct

Name: ydiA [C]

Synonym: Lm4b_01882

Alternate gene names: 226224469

Gene position: 1925423-1926235 (Clockwise)

Preceding gene: 226224468

Following gene: 226224470

Centisome position: 66.1

GC content: 40.71

Gene sequence:

>813_bases
ATGGAAAATCCGGTTATTATATACGTTATTTCAGATGCTATCGGAGAAACTGCTCAACATATTATTCGCGCGGTAACAGC
TCAGTTTTCGCTTAATAAGCCTGCGGACATTCGCCGCCATGCTTTTATTCGTGATGAGAGCGCTTTACTTGAAACGTTAG
AAGAAGCCAAAGCGGCAGATGGTATCGTCGTTCAAACGCTCGTACAAGCTAAGTTAGCTGAGTATGCCACTAATTTTTGT
GTGCAAAACAATATTCCAAACGTAGATTTGTTACATACACTAACCGCTGCGGTCGAAGCAAAAACTGGCTTAAAATCTAA
ACAAGACCCAGGAAATATGCGTCGTCTTGATAGCAATTATTTTGATCGTATTGCTGCCATTGAATTTGCAGTAAAATATG
ATGATTGTAAAGATCCACGTGGCCTATTAGATGCAGATATTGTTCTTGTTGGGGTATCAAGAACGAGCAAAACCCCTCTG
AGTAGCTTTCTTGCCAATCAAAATTGGAAAGTTGCTAATGTACCACTTGTTCCCGAAATTCCGATTCCAGCTGAACTTTT
CCAAATCCCAGCGGAACGTATTATCGGCCTTACAACCACCCCAGAAAAACTAGCGCAAATTCGCAAAGTCCGTTTAAAAT
CCATTGGTTTAGACGAAGCAAGCAGTTATTCCAGTGAAAAACGCATTTTAGAGGAACTAGAATATGGTTATGACACATTC
AAAAAGCTTGGCTGCCAAGTCATTCATGTAGAAGATAAAGCCATTGAGGAAACCGCTGCCCTAATCACGGAAATTATCAC
GAGTTACCACTAA

Upstream 100 bases:

>100_bases
TCCTGTTCTAGAAAACACCAAAGTCGTCGGAAAAATTTCAAAAACCCGTATTACTGCGCTATTTGTAGATACAATTAAAA
AGGTTTAGTAGGAGGAAAAT

Downstream 100 bases:

>100_bases
TTTGAAGAGGTGAATAATGTGAGAAAATTTGTCTATCAGTTCAGTGAAGGTTCTAAAGAAATGAAAAATATTTTAGGAGG
AAAAGGTGCTAATTTGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MENPVIIYVISDAIGETAQHIIRAVTAQFSLNKPADIRRHAFIRDESALLETLEEAKAADGIVVQTLVQAKLAEYATNFC
VQNNIPNVDLLHTLTAAVEAKTGLKSKQDPGNMRRLDSNYFDRIAAIEFAVKYDDCKDPRGLLDADIVLVGVSRTSKTPL
SSFLANQNWKVANVPLVPEIPIPAELFQIPAERIIGLTTTPEKLAQIRKVRLKSIGLDEASSYSSEKRILEELEYGYDTF
KKLGCQVIHVEDKAIEETAALITEIITSYH

Sequences:

>Translated_270_residues
MENPVIIYVISDAIGETAQHIIRAVTAQFSLNKPADIRRHAFIRDESALLETLEEAKAADGIVVQTLVQAKLAEYATNFC
VQNNIPNVDLLHTLTAAVEAKTGLKSKQDPGNMRRLDSNYFDRIAAIEFAVKYDDCKDPRGLLDADIVLVGVSRTSKTPL
SSFLANQNWKVANVPLVPEIPIPAELFQIPAERIIGLTTTPEKLAQIRKVRLKSIGLDEASSYSSEKRILEELEYGYDTF
KKLGCQVIHVEDKAIEETAALITEIITSYH
>Mature_270_residues
MENPVIIYVISDAIGETAQHIIRAVTAQFSLNKPADIRRHAFIRDESALLETLEEAKAADGIVVQTLVQAKLAEYATNFC
VQNNIPNVDLLHTLTAAVEAKTGLKSKQDPGNMRRLDSNYFDRIAAIEFAVKYDDCKDPRGLLDADIVLVGVSRTSKTPL
SSFLANQNWKVANVPLVPEIPIPAELFQIPAERIIGLTTTPEKLAQIRKVRLKSIGLDEASSYSSEKRILEELEYGYDTF
KKLGCQVIHVEDKAIEETAALITEIITSYH

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=287, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 29963; Mature: 29963

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPVIIYVISDAIGETAQHIIRAVTAQFSLNKPADIRRHAFIRDESALLETLEEAKAAD
CCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
GIVVQTLVQAKLAEYATNFCVQNNIPNVDLLHTLTAAVEAKTGLKSKQDPGNMRRLDSNY
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
FDRIAAIEFAVKYDDCKDPRGLLDADIVLVGVSRTSKTPLSSFLANQNWKVANVPLVPEI
HHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEECCCCCCCC
PIPAELFQIPAERIIGLTTTPEKLAQIRKVRLKSIGLDEASSYSSEKRILEELEYGYDTF
CCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCHHHH
KKLGCQVIHVEDKAIEETAALITEIITSYH
HHHCCEEEEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENPVIIYVISDAIGETAQHIIRAVTAQFSLNKPADIRRHAFIRDESALLETLEEAKAAD
CCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
GIVVQTLVQAKLAEYATNFCVQNNIPNVDLLHTLTAAVEAKTGLKSKQDPGNMRRLDSNY
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
FDRIAAIEFAVKYDDCKDPRGLLDADIVLVGVSRTSKTPLSSFLANQNWKVANVPLVPEI
HHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEECCCCCCCC
PIPAELFQIPAERIIGLTTTPEKLAQIRKVRLKSIGLDEASSYSSEKRILEELEYGYDTF
CCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCHHHH
KKLGCQVIHVEDKAIEETAALITEIITSYH
HHHCCEEEEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]