| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224308
Identifier: 226224308
GI number: 226224308
Start: 1754250
End: 1754894
Strand: Direct
Name: 226224308
Synonym: Lm4b_01719
Alternate gene names: NA
Gene position: 1754250-1754894 (Clockwise)
Preceding gene: 226224303
Following gene: 226224310
Centisome position: 60.23
GC content: 36.59
Gene sequence:
>645_bases ATGGAAGGAGTAGGAAATAAAGTGATTGTTTTAGCAGGAATGATTGGTGCTGGGAAAAGTAGCTATACAGAGCTAATCGC AAATGAACTCGGAACAAAGGCATTTTATGAAAGCATTAAGGATAACCGCATCCTTGAAATGTTTTATGAAGACCCAAAAA GATGGGCTTTTGCCTTACAAATATATTTTTTAAATACCCGCTTTCGTAGTATTAAAGCTGCGTTAACGGATCAAAATAAT GTGCTTGATCGGAGCATATACGAGGACGCGCTTTTTACGCAAATTAATTTTGAAGAAGGTAACATTTCGGAGCCTGAGAT GGATACATACCTTGATTTACTCGACAATATGATGGAAGAACTTGCTTATATGCCGAAAAAAGCGCCTGATTTGTTGATTT ATTTGCGAGGAAGTTTAGACACTGTATTGAGCCGAATTGCTCTCCGTGGTCGTCCTTATGAACAAACCTTTGATAATCCA GGTTTACTTGACTATTACAAGCATCTGCATAGTCGTTATGACAGCTGGTTTGAGTCTTATGATAAGAGTGAAACCCTTGT TATTAATATCGACGAAATAGATATTAATCAACCAAATGACGCAGATTATGTCATGCAACTTATTCATGAAAAATTAAAAC GCTAA
Upstream 100 bases:
>100_bases CCCTCATTTCTTCTCTTTTATCGTACAAAAAATCTCCTTATTAAGCAAATTAGTAGTATAATGAACAGATAGTCGACCAA AAAAGGAGGCTACTCATGTT
Downstream 100 bases:
>100_bases AACAGGCTTTTTGCTGTTTTAGCGTTTTTTTAATTGATTTCGCCTAATTCTTTTTTCTTTTTCCGAATCGCCAGTGTAGC GTTAAGCTCCCCGCCAATCA
Product: deoxyguanosine kinase/deoxyadenosine kinase(I) subunit
Products: NA
Alternate protein names: DGK; DGUO kinase; Deoxynucleoside kinase complex I F-component [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYEDPKRWAFALQIYFLNTRFRSIKAALTDQNN VLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNP GLLDYYKHLHSRYDSWFESYDKSETLVINIDEIDINQPNDADYVMQLIHEKLKR
Sequences:
>Translated_214_residues MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYEDPKRWAFALQIYFLNTRFRSIKAALTDQNN VLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNP GLLDYYKHLHSRYDSWFESYDKSETLVINIDEIDINQPNDADYVMQLIHEKLKR >Mature_214_residues MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYEDPKRWAFALQIYFLNTRFRSIKAALTDQNN VLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNP GLLDYYKHLHSRYDSWFESYDKSETLVINIDEIDINQPNDADYVMQLIHEKLKR
Specific function: DGK/DAK plays an essential role in generating the deoxyribonucleotide precursors, dGTP and dATP, for DNA metabolism [H]
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
Organism=Homo sapiens, GI4503269, Length=206, Percent_Identity=29.126213592233, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI17738037, Length=205, Percent_Identity=25.8536585365854, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 24941; Mature: 24941
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYEDPKRWAFALQ CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHEEEEE IYFLNTRFRSIKAALTDQNNVLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEE EEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHH LAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNPGLLDYYKHLHSRYDSWFESY HHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHC DKSETLVINIDEIDINQPNDADYVMQLIHEKLKR CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYEDPKRWAFALQ CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHEEEEE IYFLNTRFRSIKAALTDQNNVLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEE EEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHH LAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNPGLLDYYKHLHSRYDSWFESY HHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHC DKSETLVINIDEIDINQPNDADYVMQLIHEKLKR CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896798; 8172906 [H]