| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is yhfA [C]
Identifier: 226224307
GI number: 226224307
Start: 1753763
End: 1754143
Strand: Reverse
Name: yhfA [C]
Synonym: Lm4b_01718
Alternate gene names: 226224307
Gene position: 1754143-1753763 (Counterclockwise)
Preceding gene: 226224309
Following gene: 226224306
Centisome position: 60.22
GC content: 37.01
Gene sequence:
>381_bases ATGACAAAACCATTAAAGCTAGTTTATACCGAAAATGGGTTTGACACAGGAAGTTTTTTAATCGATGACAAACTGACCGA TTATTCACCAGCGGATTTGATGTTAATGTCTATTGCCAGTTGTAGCGCCATTGTTTTTCGTAACATTTTAAAGAAAAAAC GAGTAAACTTTACCGACTTATGGATAGACGCCACAATGGAACGCATCCCAGAAGAAGAAAATCGTATAAGCGCGATACAT CTTCATTTTAAAATAACCGGTGCTGCCTTGGATCCAAAAGCACTTGAAAAAGCATTAAAATTAACACCGAAATACTGTTC GATGGTTCGTTCTGTCGAAAAAAGCATCCTTGTCGATGAAAGTCTTGAAATCATGCCATAA
Upstream 100 bases:
>100_bases AGTAGCCTCCTTTTTTGGTCGACTATCTGTTCATTATACTACTAATTTGCTTAATAAGGAGATTTTTTGTACGATAAAAG AGAAGAAATGAGGGATAACC
Downstream 100 bases:
>100_bases ACTACTGACAAGCTGCTGTTTTTTTGTTAGTATTAATGAAGACTTGGAATGATGGAGGAAAATAATGAATCAAAATCCAG TAGAAGAAGGACAAAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Stress Response Protein; OsmC-Like Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTKPLKLVYTENGFDTGSFLIDDKLTDYSPADLMLMSIASCSAIVFRNILKKKRVNFTDLWIDATMERIPEEENRISAIH LHFKITGAALDPKALEKALKLTPKYCSMVRSVEKSILVDESLEIMP
Sequences:
>Translated_126_residues MTKPLKLVYTENGFDTGSFLIDDKLTDYSPADLMLMSIASCSAIVFRNILKKKRVNFTDLWIDATMERIPEEENRISAIH LHFKITGAALDPKALEKALKLTPKYCSMVRSVEKSILVDESLEIMP >Mature_125_residues TKPLKLVYTENGFDTGSFLIDDKLTDYSPADLMLMSIASCSAIVFRNILKKKRVNFTDLWIDATMERIPEEENRISAIHL HFKITGAALDPKALEKALKLTPKYCSMVRSVEKSILVDESLEIMP
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789755, Length=98, Percent_Identity=35.7142857142857, Blast_Score=63, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14281; Mature: 14150
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPLKLVYTENGFDTGSFLIDDKLTDYSPADLMLMSIASCSAIVFRNILKKKRVNFTDL CCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH WIDATMERIPEEENRISAIHLHFKITGAALDPKALEKALKLTPKYCSMVRSVEKSILVDE HHHHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC SLEIMP CCCCCC >Mature Secondary Structure TKPLKLVYTENGFDTGSFLIDDKLTDYSPADLMLMSIASCSAIVFRNILKKKRVNFTDL CCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH WIDATMERIPEEENRISAIHLHFKITGAALDPKALEKALKLTPKYCSMVRSVEKSILVDE HHHHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC SLEIMP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA