| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224304
Identifier: 226224304
GI number: 226224304
Start: 1751521
End: 1751874
Strand: Reverse
Name: 226224304
Synonym: Lm4b_01715
Alternate gene names: NA
Gene position: 1751874-1751521 (Counterclockwise)
Preceding gene: 226224305
Following gene: 226224301
Centisome position: 60.15
GC content: 39.55
Gene sequence:
>354_bases ATGAAAAAACTATTTGATGAAACGAATGAATTTGAAGCAAAGTACTACCGAACTATTTGGTACGGCTACATCGACAATGA ATTCGCGCCAGAATTAAGTGATGAAATAAAACAACTCATTCAAAGCGACCTTACAGAAAAAACAGCAAATCCAATCGAAG CAACTCACTGGGTTTTTTATAGCGAAACCCAAGCAGGGGACGCAATTGGTGATAAAGTCCGCTCTTCCATTATGGTTCGC CACCGGGATAATAAGTTTGTCGTCCATTACAACGTGAGCGATTTCCAATTTGTTACTGTGTTTGATGTGGCAACCGCCTT TAAAGACCAATTAGAACAAGCATTGAATGCGTAA
Upstream 100 bases:
>100_bases GATTTTGATAATCATCTGTTTGAATTACACGCTGGTACATTAGAAGAACGCTTAAAAAGGTATCACGAATAGAAATAACA CCTAATAGGAGGAAACAAAC
Downstream 100 bases:
>100_bases ATAAAAAATCCCGTCTATTTTTATAGACGGGATTTTCGTTCATCCAAGTTCTTTCCAGTGCCAATTACCAATATGTAAAC CTTGGTTCATTTCACTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDLTEKTANPIEATHWVFYSETQAGDAIGDKVRSSIMVR HRDNKFVVHYNVSDFQFVTVFDVATAFKDQLEQALNA
Sequences:
>Translated_117_residues MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDLTEKTANPIEATHWVFYSETQAGDAIGDKVRSSIMVR HRDNKFVVHYNVSDFQFVTVFDVATAFKDQLEQALNA >Mature_117_residues MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDLTEKTANPIEATHWVFYSETQAGDAIGDKVRSSIMVR HRDNKFVVHYNVSDFQFVTVFDVATAFKDQLEQALNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13684; Mature: 13684
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDLTEKTANPIEATHWVFY CCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEE SETQAGDAIGDKVRSSIMVRHRDNKFVVHYNVSDFQFVTVFDVATAFKDQLEQALNA CCCCCCHHHHHHHHHHHHEEECCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDLTEKTANPIEATHWVFY CCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEE SETQAGDAIGDKVRSSIMVRHRDNKFVVHYNVSDFQFVTVFDVATAFKDQLEQALNA CCCCCCHHHHHHHHHHHHEEECCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA