Click here to switch to the map view.

The map label for this gene is recX

Identifier: 226224296

GI number: 226224296

Start: 1743267

End: 1744076

Strand: Reverse

Name: recX

Synonym: Lm4b_01707

Alternate gene names: 226224296

Gene position: 1744076-1743267 (Counterclockwise)

Preceding gene: 226224298

Following gene: 226224295

Centisome position: 59.88

GC content: 36.79

Gene sequence:

>810_bases
ATGAAAATCACGTCCATAAGTGTCCAGCAGAAAAACAAAGAACGCTACAACATTTTTATTGATGAAAAATACAACTTTAG
CGTAGACGAAGAGGTTTTAGCCCGCTACCAGCTGATGAAAGGTAAAGTTCTAACCGAGGCCAAAATAGAAGAAATTAAGC
AAGCTGATATGGTTCGAAAAGGGCTAAATAAAGCCATCAACTTCTTATCCCACCGTGTTCGCTCGGAAAAAGAAATTCGC
GATTATTTAAGAAAGCAAGAAATGGAAGCTTTTGCAATTGACGAGATTTTAAAAAAATTAGCCGACATGGATTATATTAA
TGATCTCGAATTTGCGGAACTGTATACGAAAACGCAAATCAAAACAACCCTAAAAGGTCCGCGGACCATTGAACGCGAAC
TAGTCGAAAAAGGACTAACTAGAGAAATAATTACTCAAGTTATCGAAGAATATTCGGATGAAGCTCAGCTAGAAAATGCC
ACCAAACAAGCAATAAAAATTATGAAGCGAAATAACAAAAGCGCCAAAAAAATGCTTCAACAAAAAATTATCACGGATTT
AATCCAAAAAGGCTATACGAGCGAACTAGCCAAAGTAGCCGCTACTGAAGCAACGAGCGAATTGGATGTGGCGGACGAAG
CAGAAATTTTACAAAAGCAAATCGAAAAAACAATGCGTAAAAATAAACGCTACAAACCAAGCATTGCCAAACAAAAAACA
ATCACATCGCTAATGCAGAAAGGTTTTTCTTATGATACAATTCAATCATACCTAACTGAAAATGAAATCAGTTTCGAGGA
GGAAGAGTGA

Upstream 100 bases:

>100_bases
CAATTTTATCACCTCTTCATTGTCCTAACTAGTTTATTCCCTTTTTAGTAGTATTAAAACCAATTTTTGCGGTATGATAG
ATAGGAGAAGGAGGCGGATT

Downstream 100 bases:

>100_bases
ATTGTATACGTATTTAGATGAACTAACAGCGGAATTAATGACTAAAAATCCGCATTTAGATAAAGAGCAAGCCTTGTGGT
GGATTGAAATGCTTTGGTCA

Product: recombination regulator RecX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKITSISVQQKNKERYNIFIDEKYNFSVDEEVLARYQLMKGKVLTEAKIEEIKQADMVRKGLNKAINFLSHRVRSEKEIR
DYLRKQEMEAFAIDEILKKLADMDYINDLEFAELYTKTQIKTTLKGPRTIERELVEKGLTREIITQVIEEYSDEAQLENA
TKQAIKIMKRNNKSAKKMLQQKIITDLIQKGYTSELAKVAATEATSELDVADEAEILQKQIEKTMRKNKRYKPSIAKQKT
ITSLMQKGFSYDTIQSYLTENEISFEEEE

Sequences:

>Translated_269_residues
MKITSISVQQKNKERYNIFIDEKYNFSVDEEVLARYQLMKGKVLTEAKIEEIKQADMVRKGLNKAINFLSHRVRSEKEIR
DYLRKQEMEAFAIDEILKKLADMDYINDLEFAELYTKTQIKTTLKGPRTIERELVEKGLTREIITQVIEEYSDEAQLENA
TKQAIKIMKRNNKSAKKMLQQKIITDLIQKGYTSELAKVAATEATSELDVADEAEILQKQIEKTMRKNKRYKPSIAKQKT
ITSLMQKGFSYDTIQSYLTENEISFEEEE
>Mature_269_residues
MKITSISVQQKNKERYNIFIDEKYNFSVDEEVLARYQLMKGKVLTEAKIEEIKQADMVRKGLNKAINFLSHRVRSEKEIR
DYLRKQEMEAFAIDEILKKLADMDYINDLEFAELYTKTQIKTTLKGPRTIERELVEKGLTREIITQVIEEYSDEAQLENA
TKQAIKIMKRNNKSAKKMLQQKIITDLIQKGYTSELAKVAATEATSELDVADEAEILQKQIEKTMRKNKRYKPSIAKQKT
ITSLMQKGFSYDTIQSYLTENEISFEEEE

Specific function: Modulates recA activity [H]

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003783 [H]

Pfam domain/function: PF02631 RecX [H]

EC number: NA

Molecular weight: Translated: 31448; Mature: 31448

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITSISVQQKNKERYNIFIDEKYNFSVDEEVLARYQLMKGKVLTEAKIEEIKQADMVRK
CCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GLNKAINFLSHRVRSEKEIRDYLRKQEMEAFAIDEILKKLADMDYINDLEFAELYTKTQI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KTTLKGPRTIERELVEKGLTREIITQVIEEYSDEAQLENATKQAIKIMKRNNKSAKKMLQ
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QKIITDLIQKGYTSELAKVAATEATSELDVADEAEILQKQIEKTMRKNKRYKPSIAKQKT
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ITSLMQKGFSYDTIQSYLTENEISFEEEE
HHHHHHCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKITSISVQQKNKERYNIFIDEKYNFSVDEEVLARYQLMKGKVLTEAKIEEIKQADMVRK
CCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GLNKAINFLSHRVRSEKEIRDYLRKQEMEAFAIDEILKKLADMDYINDLEFAELYTKTQI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KTTLKGPRTIERELVEKGLTREIITQVIEEYSDEAQLENATKQAIKIMKRNNKSAKKMLQ
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QKIITDLIQKGYTSELAKVAATEATSELDVADEAEILQKQIEKTMRKNKRYKPSIAKQKT
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ITSLMQKGFSYDTIQSYLTENEISFEEEE
HHHHHHCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]