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The map label for this gene is ygaE [H]

Identifier: 226224289

GI number: 226224289

Start: 1737691

End: 1738779

Strand: Direct

Name: ygaE [H]

Synonym: Lm4b_01700

Alternate gene names: 226224289

Gene position: 1737691-1738779 (Clockwise)

Preceding gene: 226224288

Following gene: 226224293

Centisome position: 59.66

GC content: 34.62

Gene sequence:

>1089_bases
ATGAAATTCGGAGCTAGAATTTTGAAAACTGGTATTGCAATCACATTGGCGCTTTTTATCGCTCAACTTTGCAATTCACC
TTCTCCATCTCTGGCAGGCATTTCCGCCGTTTTTGCTATCCAACCTTCTATTTATAGGTCCTATCGAACTATTTTAGAAC
GGGCGCAAGGGAACGTAATTGGAGCCATCATTGCAATTATTTTTGGACTTTATATTGGTAATGATTTTATTTTAATTGGT
GTCGCTTCGATTATCTGTGTTGCTTTATTAATGCAATTCCGCTTGGAGAATACGATTGGCCTTGCAGTCGTGACACTCAT
TATTGTAATGGATTCTCCTGGTAATGACTTTTTAGAAATCGCACTTATTCGTTTTGGGACAATTATGTTAGGTTTACTTG
CGGCATTTATTGTCAATCTATTCTTTTTACCACCGAAATATGAAGTTTCATTGTTTCAGTTAATTTATAATACGAATAGT
GAAATCGTTCGTTGGATTAAATTAAACTTGCGTCATGCTGCGGACTTCCCTCTTCTAAAAAAAGATATGGAGTGGATGCA
AAAACAGTTAAATCAAACGCGTAACTTATATGGTTTATACAGAGAAGAGCGTACTTTTTTAAAGAAAAATGCCATTTCAA
AAGGGCGGAAAATTGCTGTATATAGGCAAATGTTGCTTTGTTCTCAAAAAGGTTTTGAGCTTTTAAAAATCCAACATCGC
TATGAAAATGATTATTTGCAACTGCCTCCAGATAAGCAAGAGTTAATCAGACAACATATCGATTACTTAACGGATAAACA
TGAACAACTTTTACTGACATACATCGATAAAGTTTCGATTGATCTTGAATATGTAGAGTCGCATTTAGCACAGGATCCCC
AAGATTTGATGCAGCTTTTCTTGCGTGAGATGAGAGAAACAGAAAAAGATGAGTATGAGGATATGATGGATAAATACCAT
TTAATGCGTATTATTGCCTCTGTTTTTGCTTACCAAGAGACAATCGACTATTTAGAAAAATTAATTCATAGTTTTAAACT
CAGACACACGAAAGAAAACCAAATTGATATTAATGTCAATGAAGAATAA

Upstream 100 bases:

>100_bases
ATTACTTTATAAACTGGTGAGAAACGTTATAATAGAAGAAGAATGAGCGGGAAAACTTAAAAATCCCGCTCAAATAGTCT
ATAGAAAGGAATAACCTTCC

Downstream 100 bases:

>100_bases
ACAAAAAACGAGCTTGGAGATAGACTCCAAAGCTCGTTTTTTTAACGGTATTCTTTGTACTTTTCATACCAAATGTCAAT
GTAGTCAGGGGAAAACGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKFGARILKTGIAITLALFIAQLCNSPSPSLAGISAVFAIQPSIYRSYRTILERAQGNVIGAIIAIIFGLYIGNDFILIG
VASIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS
EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAISKGRKIAVYRQMLLCSQKGFELLKIQHR
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLEYVESHLAQDPQDLMQLFLREMRETEKDEYEDMMDKYH
LMRIIASVFAYQETIDYLEKLIHSFKLRHTKENQIDINVNEE

Sequences:

>Translated_362_residues
MKFGARILKTGIAITLALFIAQLCNSPSPSLAGISAVFAIQPSIYRSYRTILERAQGNVIGAIIAIIFGLYIGNDFILIG
VASIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS
EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAISKGRKIAVYRQMLLCSQKGFELLKIQHR
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLEYVESHLAQDPQDLMQLFLREMRETEKDEYEDMMDKYH
LMRIIASVFAYQETIDYLEKLIHSFKLRHTKENQIDINVNEE
>Mature_362_residues
MKFGARILKTGIAITLALFIAQLCNSPSPSLAGISAVFAIQPSIYRSYRTILERAQGNVIGAIIAIIFGLYIGNDFILIG
VASIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS
EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAISKGRKIAVYRQMLLCSQKGFELLKIQHR
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLEYVESHLAQDPQDLMQLFLREMRETEKDEYEDMMDKYH
LMRIIASVFAYQETIDYLEKLIHSFKLRHTKENQIDINVNEE

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 42068; Mature: 42068

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGARILKTGIAITLALFIAQLCNSPSPSLAGISAVFAIQPSIYRSYRTILERAQGNVI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHH
GAIIAIIFGLYIGNDFILIGVASIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNSEIVRWIKLNLRHAADFPLLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
KDMEWMQKQLNQTRNLYGLYREERTFLKKNAISKGRKIAVYRQMLLCSQKGFELLKIQHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLEYVESHLAQDPQDLMQLF
HCCCCEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LREMRETEKDEYEDMMDKYHLMRIIASVFAYQETIDYLEKLIHSFKLRHTKENQIDINVN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
EE
CC
>Mature Secondary Structure
MKFGARILKTGIAITLALFIAQLCNSPSPSLAGISAVFAIQPSIYRSYRTILERAQGNVI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHH
GAIIAIIFGLYIGNDFILIGVASIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNSEIVRWIKLNLRHAADFPLLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
KDMEWMQKQLNQTRNLYGLYREERTFLKKNAISKGRKIAVYRQMLLCSQKGFELLKIQHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLEYVESHLAQDPQDLMQLF
HCCCCEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LREMRETEKDEYEDMMDKYHLMRIIASVFAYQETIDYLEKLIHSFKLRHTKENQIDINVN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]