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The map label for this gene is ytqA [H]

Identifier: 226224264

GI number: 226224264

Start: 1698057

End: 1699022

Strand: Direct

Name: ytqA [H]

Synonym: Lm4b_01674

Alternate gene names: 226224264

Gene position: 1698057-1699022 (Clockwise)

Preceding gene: 226224248

Following gene: 226224265

Centisome position: 58.3

GC content: 42.34

Gene sequence:

>966_bases
GTGAAACAAACGAATCCATTTGTATATAGCAATGATAATAAAAGATACCATACATGGAACTACTGCTTAAGAGAAGAATT
TGGGCAAAAGACATACAAAGTGGCGCTTGATGGCGGCTTTGATTGTCCGAATCGTGACGGTACGGTAGCGCATGGTGGTT
GTACATTTTGTAGCGCGGCTGGTTCTGGGGACTTTGCTGGCAACCGAGCGCTTGATTTAAAAGTACAATTCCAGCAAGTG
CGCGACAAGATGCAAACGAAATGGAAAGACGGGAAATGTATCGCTTATTTCCAAGCTTTCACGAATACACATGCACCGGT
TGCCGAGTTACGTGAGAAATTTGAAACTGTTTTGAATGAGCCGGGTGTAGTTGGGCTTTCGATTGCGACAAGACCGGACT
GTTTGCCAGATGATGTGGTGGAATATTTAGCTGAGTTGAATGAACGTACTTATTTATGGTTGGAGCTTGGATTGCAGTCT
GCTCATGATGAGACTGGCCGCTTAATCAACCGGGCGCATGATTATGATTGTTATCTAGAAGGAGTGCACAAACTGCAAAA
GCACAATATCCGGATTTGTACCCACATTATTAACGGTCTTCCAAAAGAAACACCAGAAATGATGATGGAAACAACGCGGA
AAGTAGTCGAAAGTGGCGTGGATGGTATCAAAATCCATTTGCTCCATTTATTAAAAGGAACGCCAATGGTAGAAGATTAT
AAAAAAGGTGACTTAGAATTTTTAACTCGGGATGGCTATGTAAACTTAGTCGCTGATCAACTAGAGATCTTACCGCCTGA
GATGGTTATTCACCGGATTACTGGTGATGGTGGCGTAGATGATTTAATTGGCCCTGTTTGGAGTTTAAATAAGTTTGAAG
TGTTGAATGCGATTGATGCAGAACTTGTTCGAAGAGATAGCTGGCAAGGGAAACACTATCAACCTGTGGAAGTGATTTCT
GAATGA

Upstream 100 bases:

>100_bases
AATTTCATTTTTTTAGCAAGCGCTCTGAAGATTTATCTAACTTTCCTAACAAAATGTGCTAAAATGAATGGAGAATTTCA
TTTGAAGGAGTCTAAAACTA

Downstream 100 bases:

>100_bases
ATTTAAGAGGCATTCTCCCCTTCGCTCATGATACGCTACGAAAAGTAGTTCGTCCTGGTGATTATGTGATTGACACCACT
TGTGGTAATGGACACGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKQTNPFVYSNDNKRYHTWNYCLREEFGQKTYKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRALDLKVQFQQV
RDKMQTKWKDGKCIAYFQAFTNTHAPVAELREKFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQS
AHDETGRLINRAHDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLKGTPMVEDY
KKGDLEFLTRDGYVNLVADQLEILPPEMVIHRITGDGGVDDLIGPVWSLNKFEVLNAIDAELVRRDSWQGKHYQPVEVIS
E

Sequences:

>Translated_321_residues
MKQTNPFVYSNDNKRYHTWNYCLREEFGQKTYKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRALDLKVQFQQV
RDKMQTKWKDGKCIAYFQAFTNTHAPVAELREKFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQS
AHDETGRLINRAHDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLKGTPMVEDY
KKGDLEFLTRDGYVNLVADQLEILPPEMVIHRITGDGGVDDLIGPVWSLNKFEVLNAIDAELVRRDSWQGKHYQPVEVIS
E
>Mature_321_residues
MKQTNPFVYSNDNKRYHTWNYCLREEFGQKTYKVALDGGFDCPNRDGTVAHGGCTFCSAAGSGDFAGNRALDLKVQFQQV
RDKMQTKWKDGKCIAYFQAFTNTHAPVAELREKFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQS
AHDETGRLINRAHDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLKGTPMVEDY
KKGDLEFLTRDGYVNLVADQLEILPPEMVIHRITGDGGVDDLIGPVWSLNKFEVLNAIDAELVRRDSWQGKHYQPVEVIS
E

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=281, Percent_Identity=38.0782918149466, Blast_Score=224, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI133955098, Length=157, Percent_Identity=28.6624203821656, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36431; Mature: 36431

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTNPFVYSNDNKRYHTWNYCLREEFGQKTYKVALDGGFDCPNRDGTVAHGGCTFCSAA
CCCCCCCEEECCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCEECCC
GSGDFAGNRALDLKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELREKFETVLNE
CCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCC
PGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRAHDYDCYLE
CCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHH
GVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLKGTPMVEDY
HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
KKGDLEFLTRDGYVNLVADQLEILPPEMVIHRITGDGGVDDLIGPVWSLNKFEVLNAIDA
CCCCEEEEECCCEEEEEHHHHHHCCHHHEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHH
ELVRRDSWQGKHYQPVEVISE
HHHHCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MKQTNPFVYSNDNKRYHTWNYCLREEFGQKTYKVALDGGFDCPNRDGTVAHGGCTFCSAA
CCCCCCCEEECCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCEECCC
GSGDFAGNRALDLKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELREKFETVLNE
CCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHCC
PGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRAHDYDCYLE
CCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHH
GVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLKGTPMVEDY
HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
KKGDLEFLTRDGYVNLVADQLEILPPEMVIHRITGDGGVDDLIGPVWSLNKFEVLNAIDA
CCCCEEEEECCCEEEEEHHHHHHCCHHHEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHH
ELVRRDSWQGKHYQPVEVISE
HHHHCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]