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The map label for this gene is yqeI [H]

Identifier: 226224090

GI number: 226224090

Start: 1504944

End: 1505234

Strand: Reverse

Name: yqeI [H]

Synonym: Lm4b_01499

Alternate gene names: 226224090

Gene position: 1505234-1504944 (Counterclockwise)

Preceding gene: 226224091

Following gene: 226224089

Centisome position: 51.68

GC content: 34.36

Gene sequence:

>291_bases
ATGTTAACAGCTACACAAAAACGTTTTTTAAGAAAAGAAGCGCATAATATCCAACCTATTTTCCAAGTAGGAAAAGGAAG
CGTATTACCAAACTTAATTATCCACGTAAAAGAAGCACTAGAAGCGAGAGAATTAATTAAAATCTCGATTCTACAAAATT
GCGAAGAAGATAAACAAACCGTTGCAGAAAAAATTAGTGCTCGTTCAGGCGCGGAAATCGTTCAAGTCATTGGCAGAACG
ATTATTCTGTACAAAACTTCTGTAAACAAGCAACAAATTAAGTTGCCATAA

Upstream 100 bases:

>100_bases
TTGTTAATCAAGGGGCACTTGCCTTTGAAATATGGACTGGGATAAAACCAGAGCGATCACTGATGAAAGAAGCAGTACTC
GAACAATTAGGAGGAAACTA

Downstream 100 bases:

>100_bases
ATCGGGAGGAACCTACGATGAAACATAAAGTCGGCATCTTAGGTGGGACTTTTGATCCGCCGCATTTAGCGCACCTCCGC
ATGGCAGAAGAGGCTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLTATQKRFLRKEAHNIQPIFQVGKGSVLPNLIIHVKEALEARELIKISILQNCEEDKQTVAEKISARSGAEIVQVIGRT
IILYKTSVNKQQIKLP

Sequences:

>Translated_96_residues
MLTATQKRFLRKEAHNIQPIFQVGKGSVLPNLIIHVKEALEARELIKISILQNCEEDKQTVAEKISARSGAEIVQVIGRT
IILYKTSVNKQQIKLP
>Mature_96_residues
MLTATQKRFLRKEAHNIQPIFQVGKGSVLPNLIIHVKEALEARELIKISILQNCEEDKQTVAEKISARSGAEIVQVIGRT
IILYKTSVNKQQIKLP

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=95, Percent_Identity=34.7368421052632, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 10818; Mature: 10818

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTATQKRFLRKEAHNIQPIFQVGKGSVLPNLIIHVKEALEARELIKISILQNCEEDKQT
CCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VAEKISARSGAEIVQVIGRTIILYKTSVNKQQIKLP
HHHHHHCCCCHHHHHHHHHHHEEEECCCCCCCCCCC
>Mature Secondary Structure
MLTATQKRFLRKEAHNIQPIFQVGKGSVLPNLIIHVKEALEARELIKISILQNCEEDKQT
CCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VAEKISARSGAEIVQVIGRTIILYKTSVNKQQIKLP
HHHHHHCCCCHHHHHHHHHHHEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]