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The map label for this gene is ygaZ [H]

Identifier: 226224043

GI number: 226224043

Start: 1459636

End: 1460343

Strand: Direct

Name: ygaZ [H]

Synonym: Lm4b_01452

Alternate gene names: 226224043

Gene position: 1459636-1460343 (Clockwise)

Preceding gene: 226224042

Following gene: 226224044

Centisome position: 50.11

GC content: 38.28

Gene sequence:

>708_bases
TTGGAAAAAGAAAATGAGCTTAGTTTTTATGATGGTGTTAGAGCCTGCCTTCCTACCGTCCTTGGTTATGCTGGGATTGG
TATCGCTGCAGGAGTAGTAGGAAAAGCATCCCATTTAAGCCTTTTAGAAGTGACGCTACTTGCGATTATCGTTTATGCAG
GTGCGGCGCAATTTATTATTTCTGGTTTGTTATTACTACAAAGTCCGATATCAGCAATCATTTTTACTACTTTTTTAATT
AATTCAAGGCATTTTTTAATGAGTATGGCGGAAGCTCCTCATTTTAAGAAGTATTCTTTGTGGAATAATATTGGGATTGG
TGCCCTTCTGACGGATGAAACGTTTGGGGTTTCGATGAATCAGATTGGTAATAAAAAACCTGTTAGTGCTAAATGGATGC
ACGGAATAAATGTAACTGCCTACTTGGCATGGATTGTCGCTTGTATCGTTGGGGCATTTATTGGCAACTGGCTCCCAAAT
CCAGAACAATTTGGTTTAGACTTTGCGTTGTCTGCAATGTTTATCGGTTTGCTATATTTACAAGTAGTGAGTGATAAAAG
CAAAAAAATAAGTACGAGTTTGTTCGTCATGATACTAGTCGCTGTATTTTTAATTCTCTTTATGCGTGTGATGACGCCAG
AACTAGCTATTTTAACTGCAACCTTACTCGGATGTTTGATGGGAGTGATTATAGAGAGATGGCGTTAA

Upstream 100 bases:

>100_bases
AAGAAATTGATATTTTGGCAGAAGAATATTTTGAAAAGAAAACAGATTTGGAAAGCCTTAGATAATCGTATCGGGGTTTT
TGTTTCAAGGGGGATTTTTG

Downstream 100 bases:

>100_bases
GTTCCTATACTTTATTTGTCATTGTTGGATGTGGACTTGTGACGTTTATACCGCGTGTCTTGCCGTTTATATTTGTGCGT
AAATTACAGCTTCCAGATGT

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MEKENELSFYDGVRACLPTVLGYAGIGIAAGVVGKASHLSLLEVTLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLI
NSRHFLMSMAEAPHFKKYSLWNNIGIGALLTDETFGVSMNQIGNKKPVSAKWMHGINVTAYLAWIVACIVGAFIGNWLPN
PEQFGLDFALSAMFIGLLYLQVVSDKSKKISTSLFVMILVAVFLILFMRVMTPELAILTATLLGCLMGVIIERWR

Sequences:

>Translated_235_residues
MEKENELSFYDGVRACLPTVLGYAGIGIAAGVVGKASHLSLLEVTLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLI
NSRHFLMSMAEAPHFKKYSLWNNIGIGALLTDETFGVSMNQIGNKKPVSAKWMHGINVTAYLAWIVACIVGAFIGNWLPN
PEQFGLDFALSAMFIGLLYLQVVSDKSKKISTSLFVMILVAVFLILFMRVMTPELAILTATLLGCLMGVIIERWR
>Mature_235_residues
MEKENELSFYDGVRACLPTVLGYAGIGIAAGVVGKASHLSLLEVTLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLI
NSRHFLMSMAEAPHFKKYSLWNNIGIGALLTDETFGVSMNQIGNKKPVSAKWMHGINVTAYLAWIVACIVGAFIGNWLPN
PEQFGLDFALSAMFIGLLYLQVVSDKSKKISTSLFVMILVAVFLILFMRVMTPELAILTATLLGCLMGVIIERWR

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=239, Percent_Identity=28.8702928870293, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25650; Mature: 25650

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKENELSFYDGVRACLPTVLGYAGIGIAAGVVGKASHLSLLEVTLLAIIVYAGAAQFII
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGLLLLQSPISAIIFTTFLINSRHFLMSMAEAPHFKKYSLWNNIGIGALLTDETFGVSMN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCCCCHH
QIGNKKPVSAKWMHGINVTAYLAWIVACIVGAFIGNWLPNPEQFGLDFALSAMFIGLLYL
HCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QVVSDKSKKISTSLFVMILVAVFLILFMRVMTPELAILTATLLGCLMGVIIERWR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKENELSFYDGVRACLPTVLGYAGIGIAAGVVGKASHLSLLEVTLLAIIVYAGAAQFII
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGLLLLQSPISAIIFTTFLINSRHFLMSMAEAPHFKKYSLWNNIGIGALLTDETFGVSMN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCCCCHH
QIGNKKPVSAKWMHGINVTAYLAWIVACIVGAFIGNWLPNPEQFGLDFALSAMFIGLLYL
HCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QVVSDKSKKISTSLFVMILVAVFLILFMRVMTPELAILTATLLGCLMGVIIERWR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]