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The map label for this gene is yufP [H]

Identifier: 226223991

GI number: 226223991

Start: 1400390

End: 1401442

Strand: Direct

Name: yufP [H]

Synonym: Lm4b_01399

Alternate gene names: 226223991

Gene position: 1400390-1401442 (Clockwise)

Preceding gene: 226223990

Following gene: 226223992

Centisome position: 48.08

GC content: 40.08

Gene sequence:

>1053_bases
ATGTCTAAACGACTACAAGCATTAGTTATCCCAGTTACAGCCGTTATCCTTGGACTTATCTGCGGTGCGATTATCATGCT
TATTTTTGGATATGACCCAATTGCTGGTTATTCGGCTCTGATTCAAGGTGTTATCGGAGAAAATTTCTATATTGGTGAAA
CAATCCGCCAAGCTACACCGTACATTTTAGTTGGTCTATCTGTTGCAGTTGCATTTAAAGCTGGACTTTTCAATATTGGT
GCGGAAGGTCAAATGCTGATGGGATGGTTAGGTTCCATTATCATCGCTGTAAACTTTGACGGTTTAACTAAATGGATTCA
TTTACCACTTGCGATTATTACTGGTATGGTTTTTGGTGCACTTTGGGCATTCATCCCAGGTATATTAAAAGCAACTTTAC
GTGTGAATGAAGTTATCGTAACAATCATGCTTAATTACACGGCACTTTATATTTTCAACTATGTCGTACAAAATTTACTT
ACAGATGGTTTGGACAAAACGCAAGAAATTCATGCGTCCGCTTCCTTACAATCTGAATTATTACAATCACTTACAGATTA
TTCGTCTCTACATTGGGGGATTTTAATAGCCCTAGGTTTTGCACTTATTATTTGGTTAATGTTAAACAAAACTACTTTTG
GTTACGAAATCGAAGCAGTTGGATTTAACGAAAATGCATCGCAATATGCCGGTATGAGTGTAAAGAAAACAATTATCTTT
TCCATGGTTATTGCCGGAGCGCTTGCTGGTCTTGGTGGCGTAATGGAAGGTCTTGGAACATACGGAACGGCTTATGTATT
AACTTCTTCTCCAGGGATTGGTTTTGACGGTATCGCCGTTGCATTACTCGGAGGAAGTTCTCCAATTGGGATTGTCTTCT
CTGCCATCTTGTTTGGCGCTCTAAAAGTCGGAGCACTAAACATGCCAGCAGTTGCGGGCGTTCCAAACGAATTAGTCAAC
GTAATTATCGCTCTGATTATCTTCTTTGTGGCATCCAGCTACATTATCCGCTGGGCGATGGCAAAATTTAAGAAGGGGGC
GAAAGCAGAATGA

Upstream 100 bases:

>100_bases
ATCGTTGCTATTGTTGATCCGAAAGAAACAACGGAGCAAGAACTTGGTCTGATGATGGCTGGTTCATCCAAACAGGAAGC
GGAAATGGGGGAGAAAGAGC

Downstream 100 bases:

>100_bases
CAGCCATTTTAGCAACAATTGTTTCTAGTACACTGCTTATGGCAGGCCCACTAATTTTTACTGCTCTCGGGGGCGTTTAT
TCAGAACGAGGCGGTGTGGT

Product: ABC transporter (permease protein)

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSKRLQALVIPVTAVILGLICGAIIMLIFGYDPIAGYSALIQGVIGENFYIGETIRQATPYILVGLSVAVAFKAGLFNIG
AEGQMLMGWLGSIIIAVNFDGLTKWIHLPLAIITGMVFGALWAFIPGILKATLRVNEVIVTIMLNYTALYIFNYVVQNLL
TDGLDKTQEIHASASLQSELLQSLTDYSSLHWGILIALGFALIIWLMLNKTTFGYEIEAVGFNENASQYAGMSVKKTIIF
SMVIAGALAGLGGVMEGLGTYGTAYVLTSSPGIGFDGIAVALLGGSSPIGIVFSAILFGALKVGALNMPAVAGVPNELVN
VIIALIIFFVASSYIIRWAMAKFKKGAKAE

Sequences:

>Translated_350_residues
MSKRLQALVIPVTAVILGLICGAIIMLIFGYDPIAGYSALIQGVIGENFYIGETIRQATPYILVGLSVAVAFKAGLFNIG
AEGQMLMGWLGSIIIAVNFDGLTKWIHLPLAIITGMVFGALWAFIPGILKATLRVNEVIVTIMLNYTALYIFNYVVQNLL
TDGLDKTQEIHASASLQSELLQSLTDYSSLHWGILIALGFALIIWLMLNKTTFGYEIEAVGFNENASQYAGMSVKKTIIF
SMVIAGALAGLGGVMEGLGTYGTAYVLTSSPGIGFDGIAVALLGGSSPIGIVFSAILFGALKVGALNMPAVAGVPNELVN
VIIALIIFFVASSYIIRWAMAKFKKGAKAE
>Mature_349_residues
SKRLQALVIPVTAVILGLICGAIIMLIFGYDPIAGYSALIQGVIGENFYIGETIRQATPYILVGLSVAVAFKAGLFNIGA
EGQMLMGWLGSIIIAVNFDGLTKWIHLPLAIITGMVFGALWAFIPGILKATLRVNEVIVTIMLNYTALYIFNYVVQNLLT
DGLDKTQEIHASASLQSELLQSLTDYSSLHWGILIALGFALIIWLMLNKTTFGYEIEAVGFNENASQYAGMSVKKTIIFS
MVIAGALAGLGGVMEGLGTYGTAYVLTSSPGIGFDGIAVALLGGSSPIGIVFSAILFGALKVGALNMPAVAGVPNELVNV
IIALIIFFVASSYIIRWAMAKFKKGAKAE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37144; Mature: 37013

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLQALVIPVTAVILGLICGAIIMLIFGYDPIAGYSALIQGVIGENFYIGETIRQATP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHCCC
YILVGLSVAVAFKAGLFNIGAEGQMLMGWLGSIIIAVNFDGLTKWIHLPLAIITGMVFGA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHH
LWAFIPGILKATLRVNEVIVTIMLNYTALYIFNYVVQNLLTDGLDKTQEIHASASLQSEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LQSLTDYSSLHWGILIALGFALIIWLMLNKTTFGYEIEAVGFNENASQYAGMSVKKTIIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCHHHHHHHH
SMVIAGALAGLGGVMEGLGTYGTAYVLTSSPGIGFDGIAVALLGGSSPIGIVFSAILFGA
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHEEEECCCCCHHHHHHHHHHHH
LKVGALNMPAVAGVPNELVNVIIALIIFFVASSYIIRWAMAKFKKGAKAE
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKRLQALVIPVTAVILGLICGAIIMLIFGYDPIAGYSALIQGVIGENFYIGETIRQATP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHCCC
YILVGLSVAVAFKAGLFNIGAEGQMLMGWLGSIIIAVNFDGLTKWIHLPLAIITGMVFGA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHH
LWAFIPGILKATLRVNEVIVTIMLNYTALYIFNYVVQNLLTDGLDKTQEIHASASLQSEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LQSLTDYSSLHWGILIALGFALIIWLMLNKTTFGYEIEAVGFNENASQYAGMSVKKTIIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCHHHHHHHH
SMVIAGALAGLGGVMEGLGTYGTAYVLTSSPGIGFDGIAVALLGGSSPIGIVFSAILFGA
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHEEEECCCCCHHHHHHHHHHHH
LKVGALNMPAVAGVPNELVNVIIALIIFFVASSYIIRWAMAKFKKGAKAE
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]