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The map label for this gene is oxaA2 [H]

Identifier: 226223980

GI number: 226223980

Start: 1388421

End: 1389248

Strand: Reverse

Name: oxaA2 [H]

Synonym: Lm4b_01388

Alternate gene names: 226223980

Gene position: 1389248-1388421 (Counterclockwise)

Preceding gene: 226223981

Following gene: 226223954

Centisome position: 47.7

GC content: 35.75

Gene sequence:

>828_bases
TTGAAAAAGAAAAATATTATTTTAATTAGCGTTTTACTTGGTGCTTTACTATTACTTACAGGTTGTAGTATGGACCCTTC
ACAAAATACAGATGGTTTTTTCAGCACTTATTTAATCCAACCATTTACTAGTTTTATTATGTTCGTTGCAAAGTTTGTTG
GGGGTAATTACGGAATTGCGATTATTATTACAACGTTACTTATCCGTGCACTAATTATGCCACTAAACTTGCGTACTGCT
AAAGCTCAAATGGGAATGCAATCCAAAATGGCCGTTGCCAAACCAGAAATTGATGAAATTCAAGCTCGACTAAAACGTGC
AACATCGAAAGAAGAACAAGCCACTATTCAAAAAGAAATGATGGCCGTCTATTCCAAGTATAATATCAATCCAATGCAAA
TGGGTTGTTTACCATTACTTATTCAAATGCCAATATTGATGGCTTTCTATTATGCTATTCGCGGATCTTCCGAAATTGCT
AGCCACACATTCTTATGGTTTAACTTAGGTTCACCGGATATGGTGCTGGCAATTATCGCCGGGCTTGTCTACTTAGCACA
ATACTTTGTTTCCATGATTGGTTATTCACCAGAACAAAAGAAACAAATGAAAATTATCGGTTTAATGTCTCCTATTATGA
TTTTATTCGTTTCCTTCACAGCTCCCTCTGCACTAGCGTTATACTGGGCTGTGGGCGGACTCTTCTTAGCAGGTCAAACA
TTACTAACGAAAAAACTTTACATGAATAAACACCCAGAAATTAAAGTAATGGAGCAAGAAGAAAAAGAATTCGAGCAAAT
CGTGGAAGAACAAAAGAAAGAAAAATAA

Upstream 100 bases:

>100_bases
TATAACCAGGAAATGTAGCGCCATTACTGATGATGAAGACAGTTTTTCATTTTCCAACGTATGAATTGATTATTTTACTA
TTTAGGAGGAAAATGAAACA

Downstream 100 bases:

>100_bases
AAAAAACCGCAACCTCGTCATAAGGTTGCGGTTTTTTTATTTGGATTTTGGTTCAATGTAAGGAAGTGTAATTTTTATCG
TTGTACCTTTATCTGGCTCA

Product: OxaA-like protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTA
KAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIA
SHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQT
LLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK

Sequences:

>Translated_275_residues
MKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTA
KAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIA
SHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQT
LLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK
>Mature_275_residues
MKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTSFIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTA
KAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIA
SHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQT
LLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK

Specific function: Required for the insertion of integral membrane proteins into the membrane. May also be involved in protein secretion processes [H]

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=203, Percent_Identity=33.9901477832512, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708
- InterPro:   IPR023060 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 30928; Mature: 30928

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTSFIMFVAKFVGGNYGIA
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQATIQKEM
HHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
MAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFLWFNLGSPDMVLAIIA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCHHHHHHHHH
GLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTSFIMFVAKFVGGNYGIA
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQARLKRATSKEEQATIQKEM
HHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
MAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIASHTFLWFNLGSPDMVLAIIA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCHHHHHHHHH
GLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVSFTAPSALALYWAVGGLFLAGQT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]