| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226223944
Identifier: 226223944
GI number: 226223944
Start: 1353106
End: 1353390
Strand: Reverse
Name: 226223944
Synonym: Lm4b_01351
Alternate gene names: NA
Gene position: 1353390-1353106 (Counterclockwise)
Preceding gene: 226223945
Following gene: 226223943
Centisome position: 46.47
GC content: 31.93
Gene sequence:
>285_bases TTGAATAAAATTAACGGATTCTCTTTAGTTGAAAGCATGGTTTCACTTCTCCTTTTTTCAATGGTTTGTAGTTTTCTATT ACCCACAGCAATGACTATTTTTGAAAAACTAGACTATCAAAAAGAAACTAGCAGAGTCTATCAAGAAATTTACGAACATA GCGAACTATTACGGCACAAAAGCGTTCCAGTTAACTTTAAGGATGAACGTATCGAAAGTTTCCATTATCAAGGAGGTATC CAAATTTGTGCAAAAAATAAATCGGAAGAAAAATGTATCTTTTAG
Upstream 100 bases:
>100_bases AGTACAGATGGATCCATTAATCGTTTTTCAACAATTCACCTGACAAGTTCGACAAATAACTACAAGCTAATATTTCAAAT CGGAAAGGGGCGTTTTAGAA
Downstream 100 bases:
>100_bases AAATGGCTCACCTGCTTTCACTCTTCTTGAAACAATCTTGTCTATTACGATCATTTTAAGTATTAGCTCGCTCATTCCAT TATTTTTTCAATGCTATAAC
Product: comG operon protein 5 (comGE)
Products: NA
Alternate protein names: ComG Operon
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MNKINGFSLVESMVSLLLFSMVCSFLLPTAMTIFEKLDYQKETSRVYQEIYEHSELLRHKSVPVNFKDERIESFHYQGGI QICAKNKSEEKCIF
Sequences:
>Translated_94_residues MNKINGFSLVESMVSLLLFSMVCSFLLPTAMTIFEKLDYQKETSRVYQEIYEHSELLRHKSVPVNFKDERIESFHYQGGI QICAKNKSEEKCIF >Mature_94_residues MNKINGFSLVESMVSLLLFSMVCSFLLPTAMTIFEKLDYQKETSRVYQEIYEHSELLRHKSVPVNFKDERIESFHYQGGI QICAKNKSEEKCIF
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11018; Mature: 11018
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKINGFSLVESMVSLLLFSMVCSFLLPTAMTIFEKLDYQKETSRVYQEIYEHSELLRHK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC SVPVNFKDERIESFHYQGGIQICAKNKSEEKCIF CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC >Mature Secondary Structure MNKINGFSLVESMVSLLLFSMVCSFLLPTAMTIFEKLDYQKETSRVYQEIYEHSELLRHK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC SVPVNFKDERIESFHYQGGIQICAKNKSEEKCIF CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA