| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223722
Identifier: 226223722
GI number: 226223722
Start: 1138651
End: 1139250
Strand: Direct
Name: 226223722
Synonym: Lm4b_01124
Alternate gene names: NA
Gene position: 1138651-1139250 (Clockwise)
Preceding gene: 226223721
Following gene: 226223723
Centisome position: 39.09
GC content: 32.5
Gene sequence:
>600_bases ATGTTATCCGATATCACAATTACAATTCCTAACAAAACAGCTCAAACAAAATACGATAATCTAGCAAAAAACATGTCTTT TAAATCAAAAGAGGATTTGGAGTCATTGCTTGATTTGATCAAGATTTTGTATATAAACAATTATTATGAAGAGGCGCTTT TGTGTTGCCGACTAACGAACGACGTAGAATTTGATAATGATTTTGATGTTTGGACATTTATTCATAGGATTTGGATGTTT GAAATGCAAATACTTGTGCATTTTGGGGAAAAAGAAGAGGCCGAAGAAATTGCCACTAAAATAGAGGCGCATTTTAAAAT TCCAATGAAAATATGGAATACTCCTGAAAAAAGATACGCGCAGTATAAAAAGAATCGTTCTCGGATTGTTCTTAAGGATC TTAGCTATGAAGAAAAAATCAATAGCACACCTAGAGGAGAATCTGGAACATTTGATTGGAAATTTGTCGCATTATCAAGT CTTATCAAACCAATTACTTTGAACAATATGACTGGTGTTTCGGTAGAAGAAGCAGAAGAAATATTTAGACAATATTCAGC AGAGTTACAACAAACGAAAAAGTATGGAGTTTCGTTATAA
Upstream 100 bases:
>100_bases CCATCATTTAGTAGAAAGAAAATTTAATGATAATAAGTAGTAACTCGTTTTGTAAATTTTACTACCATATTTATACTCAA CCAAAAAAGAAGGAAAAAAC
Downstream 100 bases:
>100_bases TTGCAGATATCTCATGTATTTGTAAAAGTCTTTGTAGTAAACTAGTAACAGAAGCTACCAAAACGGCTTTTTATTTCACA AATAATAATGTACTATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLSDITITIPNKTAQTKYDNLAKNMSFKSKEDLESLLDLIKILYINNYYEEALLCCRLTNDVEFDNDFDVWTFIHRIWMF EMQILVHFGEKEEAEEIATKIEAHFKIPMKIWNTPEKRYAQYKKNRSRIVLKDLSYEEKINSTPRGESGTFDWKFVALSS LIKPITLNNMTGVSVEEAEEIFRQYSAELQQTKKYGVSL
Sequences:
>Translated_199_residues MLSDITITIPNKTAQTKYDNLAKNMSFKSKEDLESLLDLIKILYINNYYEEALLCCRLTNDVEFDNDFDVWTFIHRIWMF EMQILVHFGEKEEAEEIATKIEAHFKIPMKIWNTPEKRYAQYKKNRSRIVLKDLSYEEKINSTPRGESGTFDWKFVALSS LIKPITLNNMTGVSVEEAEEIFRQYSAELQQTKKYGVSL >Mature_199_residues MLSDITITIPNKTAQTKYDNLAKNMSFKSKEDLESLLDLIKILYINNYYEEALLCCRLTNDVEFDNDFDVWTFIHRIWMF EMQILVHFGEKEEAEEIATKIEAHFKIPMKIWNTPEKRYAQYKKNRSRIVLKDLSYEEKINSTPRGESGTFDWKFVALSS LIKPITLNNMTGVSVEEAEEIFRQYSAELQQTKKYGVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23432; Mature: 23432
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDITITIPNKTAQTKYDNLAKNMSFKSKEDLESLLDLIKILYINNYYEEALLCCRLTN CCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC DVEFDNDFDVWTFIHRIWMFEMQILVHFGEKEEAEEIATKIEAHFKIPMKIWNTPEKRYA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCHHHCCCCHHHHH QYKKNRSRIVLKDLSYEEKINSTPRGESGTFDWKFVALSSLIKPITLNNMTGVSVEEAEE HHHCCCCEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH IFRQYSAELQQTKKYGVSL HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLSDITITIPNKTAQTKYDNLAKNMSFKSKEDLESLLDLIKILYINNYYEEALLCCRLTN CCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC DVEFDNDFDVWTFIHRIWMFEMQILVHFGEKEEAEEIATKIEAHFKIPMKIWNTPEKRYA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCHHHCCCCHHHHH QYKKNRSRIVLKDLSYEEKINSTPRGESGTFDWKFVALSSLIKPITLNNMTGVSVEEAEE HHHCCCCEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH IFRQYSAELQQTKKYGVSL HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA