| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226223221
Identifier: 226223221
GI number: 226223221
Start: 637350
End: 637892
Strand: Direct
Name: 226223221
Synonym: Lm4b_00618
Alternate gene names: NA
Gene position: 637350-637892 (Clockwise)
Preceding gene: 226223220
Following gene: 226223222
Centisome position: 21.88
GC content: 35.54
Gene sequence:
>543_bases ATGAAAAAAGAAAAAACAGTGTTAATTATGAATTTCGATGAAGAAAGTATTTCTTACCAAGCTTTTTCTGAAATGAAAAG ATTACACCAAGAACGCAAAATCATTGGTTATCAAATGGCGGTTGTAAAACATGAGCCAGGAAATAAACTTGTTGCACAAG ATTTTCTTGATTTTACTGGTGCCGATAAAAATATGAAAGATAGCCTTATTGGTATGTTAATTGGTATTTTAGGCGGTCCA TTTGGTATTTTAATTGGTTGGATGGTCGGCGCAATCGTTGGTTCCATGCGAGATGCTGGCGAAGTGAAAGATGCTTTAAA TGTATTTGAAAGAACATTAAAAACAATTCCAGAAGGTTCTACAGGTGTCATCCTTATTGCGACAGAACAAGAATTAGCAA ATGTAAACGACGTAGCAATGGATGAGTTACACGGGCGTGTGCAACGTATGGATGAAGCTATCGTAGCTCAAGAAATCAAA AGCGCACAAGAAACAGAAGGAAAAGCAAAAGATTCTGCTAAAAAACATTGGTTTAGTAAATAA
Upstream 100 bases:
>100_bases TATTAATTGCTATTTACATGAGAGAGCGAGTAAAATGAAAGATAGGTACGATAAATAGTATCTGAATATAATACTTTATG AGGCGAGAGGGGTACAACAG
Downstream 100 bases:
>100_bases AAATATTTCAAACGAGGACAGAGAAATCTGTTCTCGTTTTTTGTGTTTTAAGAGTGTGAAAACGGGGAAATTAACAACAT AAAACACCCAGATAGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKKEKTVLIMNFDEESISYQAFSEMKRLHQERKIIGYQMAVVKHEPGNKLVAQDFLDFTGADKNMKDSLIGMLIGILGGP FGILIGWMVGAIVGSMRDAGEVKDALNVFERTLKTIPEGSTGVILIATEQELANVNDVAMDELHGRVQRMDEAIVAQEIK SAQETEGKAKDSAKKHWFSK
Sequences:
>Translated_180_residues MKKEKTVLIMNFDEESISYQAFSEMKRLHQERKIIGYQMAVVKHEPGNKLVAQDFLDFTGADKNMKDSLIGMLIGILGGP FGILIGWMVGAIVGSMRDAGEVKDALNVFERTLKTIPEGSTGVILIATEQELANVNDVAMDELHGRVQRMDEAIVAQEIK SAQETEGKAKDSAKKHWFSK >Mature_180_residues MKKEKTVLIMNFDEESISYQAFSEMKRLHQERKIIGYQMAVVKHEPGNKLVAQDFLDFTGADKNMKDSLIGMLIGILGGP FGILIGWMVGAIVGSMRDAGEVKDALNVFERTLKTIPEGSTGVILIATEQELANVNDVAMDELHGRVQRMDEAIVAQEIK SAQETEGKAKDSAKKHWFSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19984; Mature: 19984
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEKTVLIMNFDEESISYQAFSEMKRLHQERKIIGYQMAVVKHEPGNKLVAQDFLDFTG CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCC ADKNMKDSLIGMLIGILGGPFGILIGWMVGAIVGSMRDAGEVKDALNVFERTLKTIPEGS CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC TGVILIATEQELANVNDVAMDELHGRVQRMDEAIVAQEIKSAQETEGKAKDSAKKHWFSK CCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC >Mature Secondary Structure MKKEKTVLIMNFDEESISYQAFSEMKRLHQERKIIGYQMAVVKHEPGNKLVAQDFLDFTG CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCC ADKNMKDSLIGMLIGILGGPFGILIGWMVGAIVGSMRDAGEVKDALNVFERTLKTIPEGS CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC TGVILIATEQELANVNDVAMDELHGRVQRMDEAIVAQEIKSAQETEGKAKDSAKKHWFSK CCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA