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The map label for this gene is 226223160

Identifier: 226223160

GI number: 226223160

Start: 572735

End: 573589

Strand: Direct

Name: 226223160

Synonym: Lm4b_00557

Alternate gene names: NA

Gene position: 572735-573589 (Clockwise)

Preceding gene: 226223159

Following gene: 226223161

Centisome position: 19.66

GC content: 36.02

Gene sequence:

>855_bases
ATGAAAAAAATAACGAATAACTTATTTGCAGATATCGGCTTTTTATTTTTCATCTTGCTTTGTTTCATCACAATTGGCTT
TATGATCAATACGCCGGATGAATATTTGCGAAACATTATTTTATTAAATATCACCTTTTTACTTGTGATTATCACCTATT
TTACGAACTTAACGCTTGGTTTGATTTTAAATGTCCTCTACATTTTTATTTATGCAACTTATATTATTTATGAAATTGTC
GCAAATCAAATCGCCTATGGTTTTGGTAGCTACTTCTGGCTTATAATCACGCCCCTTTTCACAGTAGCTAGTGCGATGTT
TACAAGAAATACGTCAAGGCTTCAAGAAGAGAACACGAAAATCAAACAGCAAAATCTATATTTAGGAACGATTGACCAAG
AAACTTTGCTTAAAAATATCGTTTCATTCCAAAATGACGAGCGAATTTTTTCCAGTATTTCGCGCCGTTATGATTTACCT
TTATCACTGATGGTTATCAAAGTACGTCACTGGCGCGAGTTGAAACGATTCCAAAGCGAAGAAGAGATGCGCCTAGCGTT
ACAAGATATTTCAGCGATTTTAGAGACTTGTATTCGCACGAGTGATGTCCTTTACTTATTAGATAAAGATGATGCGACTT
GGGGACTCTTGTTACTAACTGACGAACCGGGTGGGAAATTAGTTGCGGATCGAATTAAAAGCCGTATAGCTGAAGCCAAC
ACCGAAGAATTTGCCGCGAAGTACCGTGTGAAGCTAGAACTTCGAATTGGAACAAGCCAATTTGATAGCGAAAAAGTCAA
GACACCACTTGATTTTATCGATTTAGCAACAAAAGAATTAGAATATGACGTGTAA

Upstream 100 bases:

>100_bases
TCGGAGCATTCGCGCTTCTAACCGTCGTTATCTTAGTTGTCGCTGTCCTACTAATCTTGCGTAAATATCGCCGGAGCCGG
AAGTGAGGGAGAAATAAAAA

Downstream 100 bases:

>100_bases
AATAGAGAGTTACCTTCTATAATTAGGAGGTAACTCTCATTTTTGATTGGAGGAATACCATGAACTTAGAAGAAATAGTC
GATTGTATGCTATTAAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: Signaling Protein; GGDEF Domain-Containing Protein; Diguanylate Cyclase

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIV
ANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLP
LSLMVIKVRHWRELKRFQSEEEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLLLTDEPGGKLVADRIKSRIAEAN
TEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV

Sequences:

>Translated_284_residues
MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIV
ANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLP
LSLMVIKVRHWRELKRFQSEEEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLLLTDEPGGKLVADRIKSRIAEAN
TEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV
>Mature_284_residues
MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIV
ANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLP
LSLMVIKVRHWRELKRFQSEEEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLLLTDEPGGKLVADRIKSRIAEAN
TEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33035; Mature: 33035

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLG
CCCHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLPLSLMVIKVRHWRELKRFQSE
HHHCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH
EEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLLLTDEPGGKLVADRIKSRIAEAN
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCC
TEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV
HHHHHHHHEEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLG
CCCHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLPLSLMVIKVRHWRELKRFQSE
HHHCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH
EEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLLLTDEPGGKLVADRIKSRIAEAN
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCC
TEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV
HHHHHHHHEEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA