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The map label for this gene is yrbH [C]

Identifier: 226223127

GI number: 226223127

Start: 535122

End: 535724

Strand: Direct

Name: yrbH [C]

Synonym: Lm4b_00524

Alternate gene names: 226223127

Gene position: 535122-535724 (Clockwise)

Preceding gene: 226223126

Following gene: 226223128

Centisome position: 18.37

GC content: 39.47

Gene sequence:

>603_bases
TTGGATAAACAAGCTATTTTAGATAATATTCACCAAACATGGCAAGAAGAAGCAAACGCGATTTCCCGTTTGCCGGAAGT
AACAAGTGAAGAGGCTCTCGTTAAAACGGTTGAAAAAATCGCCGAGTGCACTGGGAAAATTGTCGTAGCTGGTTGTGGAA
CATCCGGCGTCGCTGCGAAAAAATTAGTACACTCTTTCAACTGTATCGAACGTCCAGCAGTCTTTTTAACCCCATCAGAT
GCTGTGCATGGAACTCTCGGTGTACTTCAAAAAGAAGATATATTAATCCTCATTTCAAAAGGTGGGAATACAGGCGAATT
ACTTAACTTAATTCCTGCTTGCAAAACAAAAGGAAGCACACTGATTGGTGTAACAGAAAACCCAGATTCCGTTATCGCCA
AAGAAGCAGATATCTTTTTCCCAGTGAGTGTAAGCAAAGAACCAGATCCGTTTAATATGTTAGCAACGGCAAGTACAATG
GCTGTTATTGCAAGTTTTGATGCAGTTATTGTTTGCTTAATGACCTATATGAATTATACAAAAGAGCAGTTTTCCGTCAT
CCATCCTGGTGGTGCCGTTGGAAACAAATTATTAAATAAATAA

Upstream 100 bases:

>100_bases
CGAAAATCACCAAATTTTAGACGATTTGCTCGAAAATGTAACCAAAGAAAAAGTCATGCAAACTATCAACCAATTAGTAA
TTAGAGAGGATGAATAAATT

Downstream 100 bases:

>100_bases
ACAAGCAGCCAGTCGGAGGGATGCAATTTGGATGTATTAGAATATTTTAAAGAAGAAATGGTTCGATTTTCAAACGAACA
AGATAAAGAAAAATTACTTA

Product: sugar-phosphate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSD
AVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTM
AVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK

Sequences:

>Translated_200_residues
MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSD
AVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTM
AVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
>Mature_200_residues
MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSD
AVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTM
AVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI87082151, Length=197, Percent_Identity=34.010152284264, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1789588, Length=163, Percent_Identity=39.2638036809816, Blast_Score=123, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 21316; Mature: 21316

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
KLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGST
HHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCE
LIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYT
EEEEECCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQFSVIHPGGAVGNKLLNK
HHHHEEECCCCHHHHHHHCC
>Mature Secondary Structure
MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
KLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGST
HHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCE
LIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYT
EEEEECCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQFSVIHPGGAVGNKLLNK
HHHHEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]