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The map label for this gene is yjeA [H]

Identifier: 226223044

GI number: 226223044

Start: 444428

End: 445828

Strand: Direct

Name: yjeA [H]

Synonym: Lm4b_00438

Alternate gene names: 226223044

Gene position: 444428-445828 (Clockwise)

Preceding gene: 226223043

Following gene: 226223045

Centisome position: 15.26

GC content: 36.26

Gene sequence:

>1401_bases
GTGAAAATTAGGTGGATTAGACTTTCACTAGTTACCGTTCTCATTATTGCCGTGGTTTTTGTTGGTGTAATAGGTTTCCA
AAAATACCAATTTTCAAAGTCGCGCAACAAAGTAATAATGCAGATGGACAGACTAATGAAAGACCAAGATGGAGGAAATT
TCCGCCGCTTGGATAAGAAAGAAAATGGAGTGGAAATCATTTCTTACATTCCTAAAACAACTGAGAAAAAAGACAACGAA
ATTATCCAAAAAGAAATTGAAAAGGCCACAGATGCAGAGGTTAAAAAGTTAAATAGAGATAAAGAAACTCAAGGGATTAT
TTTTTACACTTACCAAAAGCATAGAATGGCCGAGCAAGCAATATCTTATAAAGCTGTTCAATCAGAGTACGTAAAAGAAG
GTAGAACTAAATTTGTACTCAAAGATAAAAAAGATATTTGCAAAAACATAGTAACCGACGCAGAAACAGGTGCTTTGTTA
ACACTTGGGGAAGTATTAATAAAAAGTAATCAAACTAAATTAAATTTAAAAACAGCTGTTGAAGAAGAACTGATTAAAAC
AGGGGGTTTTTCTTTAAAAGATGTTGGGAATCTTGGGGAAATTAAGAGTTTAGTGAAATGGAATCAAACAGATTTCGAAA
TTACGAACTCTGAACTAATTTTGCCAGTAAAAATACCAGGTGCACCGGAACCGAATAAAGTAAAAGTAAAACTTGCTGAT
ATTGCTAGTTCTGTGAATAAACGCTACTTACCAAGCAGTGTGAAAGTTCCAGAAGTGCCAAAAGCAAAAACCAACAAGCG
AATTGCGCTTACTTTTGATGATGGTCCAAGTGCCTCGGTAACACCAGGCGTACTTGATACATTGAAACGCCACAATGTAA
AAGCGACATTCTTTGTACTTGGCTCTAGTGTCATACAAAATCCGGGTTTAGTAAAACGTGAATTAGAGGAAGGGCACCAA
GTTGGCAGCCACTCATGGGATCACCCGCAATTAACTAAACAATCGACACAAGAAGTGTACAACCAAATTTTAAAAACGCA
AAAAGCAGTATTTGATCAAACTGGATATTTTCCAACTACAATGCGCCCTCCATATGGTGCAGTAAACAAACAGGTGGCTG
AAGAGATTGGTCTTCCAATAATTCAGTGGTCTGTTGATACAGAAGATTGGAAAAACAAAAATGCTGGTATAGTAACGAAA
AAAGTCCTTGCTGGTGCAACGGACGGAGCGATTGTACTAATGCATGATATTCATAAAACCACTGCTGCGAGCCTTGACGC
TACATTGACTAAATTAAAGAATCAAGGATATGAGTTTGTTACTATTGATGAACTTTATGGCGAGAAATTGCAAATTGGGA
AGCAATATTTCGATAAAACAGATTCAAGAATGGTGAAATAA

Upstream 100 bases:

>100_bases
TTTCCTATTTTAGTACAAAAGCTAGAAAGTTGCTTTTTTTCATGTATAATTGTTTTATAAGAAAAGCTGGGGAAGGTTTT
TCTAAGGTGAGGTGCATAAT

Downstream 100 bases:

>100_bases
AAATCAGTAGCTAAGATGAATGAATCATTTTAGCTACTTTTTTTATACGAAATGTAAAGTTTTCTTTACGTGAAGCTGTA
TTTATTTTATAATAACTGTA

Product: endo-1,4-beta-xylanase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKIRWIRLSLVTVLIIAVVFVGVIGFQKYQFSKSRNKVIMQMDRLMKDQDGGNFRRLDKKENGVEIISYIPKTTEKKDNE
IIQKEIEKATDAEVKKLNRDKETQGIIFYTYQKHRMAEQAISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALL
TLGEVLIKSNQTKLNLKTAVEEELIKTGGFSLKDVGNLGEIKSLVKWNQTDFEITNSELILPVKIPGAPEPNKVKVKLAD
IASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGPSASVTPGVLDTLKRHNVKATFFVLGSSVIQNPGLVKRELEEGHQ
VGSHSWDHPQLTKQSTQEVYNQILKTQKAVFDQTGYFPTTMRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKNKNAGIVTK
KVLAGATDGAIVLMHDIHKTTAASLDATLTKLKNQGYEFVTIDELYGEKLQIGKQYFDKTDSRMVK

Sequences:

>Translated_466_residues
MKIRWIRLSLVTVLIIAVVFVGVIGFQKYQFSKSRNKVIMQMDRLMKDQDGGNFRRLDKKENGVEIISYIPKTTEKKDNE
IIQKEIEKATDAEVKKLNRDKETQGIIFYTYQKHRMAEQAISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALL
TLGEVLIKSNQTKLNLKTAVEEELIKTGGFSLKDVGNLGEIKSLVKWNQTDFEITNSELILPVKIPGAPEPNKVKVKLAD
IASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGPSASVTPGVLDTLKRHNVKATFFVLGSSVIQNPGLVKRELEEGHQ
VGSHSWDHPQLTKQSTQEVYNQILKTQKAVFDQTGYFPTTMRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKNKNAGIVTK
KVLAGATDGAIVLMHDIHKTTAASLDATLTKLKNQGYEFVTIDELYGEKLQIGKQYFDKTDSRMVK
>Mature_466_residues
MKIRWIRLSLVTVLIIAVVFVGVIGFQKYQFSKSRNKVIMQMDRLMKDQDGGNFRRLDKKENGVEIISYIPKTTEKKDNE
IIQKEIEKATDAEVKKLNRDKETQGIIFYTYQKHRMAEQAISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALL
TLGEVLIKSNQTKLNLKTAVEEELIKTGGFSLKDVGNLGEIKSLVKWNQTDFEITNSELILPVKIPGAPEPNKVKVKLAD
IASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGPSASVTPGVLDTLKRHNVKATFFVLGSSVIQNPGLVKRELEEGHQ
VGSHSWDHPQLTKQSTQEVYNQILKTQKAVFDQTGYFPTTMRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKNKNAGIVTK
KVLAGATDGAIVLMHDIHKTTAASLDATLTKLKNQGYEFVTIDELYGEKLQIGKQYFDKTDSRMVK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=128, Percent_Identity=36.71875, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323339, Length=131, Percent_Identity=39.6946564885496, Blast_Score=95, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 52403; Mature: 52403

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRWIRLSLVTVLIIAVVFVGVIGFQKYQFSKSRNKVIMQMDRLMKDQDGGNFRRLDKK
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
ENGVEIISYIPKTTEKKDNEIIQKEIEKATDAEVKKLNRDKETQGIIFYTYQKHRMAEQA
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHH
ISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALLTLGEVLIKSNQTKLNLKTAV
HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEHHHHH
EEELIKTGGFSLKDVGNLGEIKSLVKWNQTDFEITNSELILPVKIPGAPEPNKVKVKLAD
HHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCEEEEEHHH
IASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGPSASVTPGVLDTLKRHNVKATFFVL
HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEE
GSSVIQNPGLVKRELEEGHQVGSHSWDHPQLTKQSTQEVYNQILKTQKAVFDQTGYFPTT
CHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKNKNAGIVTKKVLAGATDGAIVLMHDIHKT
CCCCCCHHHHHHHHHHCCEEEEEECCCHHHCCCCCCEEHHHHHCCCCCCEEEEEEHHHHH
TAASLDATLTKLKNQGYEFVTIDELYGEKLQIGKQYFDKTDSRMVK
HHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MKIRWIRLSLVTVLIIAVVFVGVIGFQKYQFSKSRNKVIMQMDRLMKDQDGGNFRRLDKK
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
ENGVEIISYIPKTTEKKDNEIIQKEIEKATDAEVKKLNRDKETQGIIFYTYQKHRMAEQA
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHH
ISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALLTLGEVLIKSNQTKLNLKTAV
HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEHHHHH
EEELIKTGGFSLKDVGNLGEIKSLVKWNQTDFEITNSELILPVKIPGAPEPNKVKVKLAD
HHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCEEEEEHHH
IASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGPSASVTPGVLDTLKRHNVKATFFVL
HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEE
GSSVIQNPGLVKRELEEGHQVGSHSWDHPQLTKQSTQEVYNQILKTQKAVFDQTGYFPTT
CHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKNKNAGIVTKKVLAGATDGAIVLMHDIHKT
CCCCCCHHHHHHHHHHCCEEEEEECCCHHHCCCCCCEEHHHHHCCCCCCEEEEEEHHHHH
TAASLDATLTKLKNQGYEFVTIDELYGEKLQIGKQYFDKTDSRMVK
HHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]