Click here to switch to the map view.

The map label for this gene is tatCy [H]

Identifier: 226222988

GI number: 226222988

Start: 390769

End: 391503

Strand: Reverse

Name: tatCy [H]

Synonym: Lm4b_00380

Alternate gene names: 226222988

Gene position: 391503-390769 (Counterclockwise)

Preceding gene: 226222989

Following gene: 226222981

Centisome position: 13.44

GC content: 37.41

Gene sequence:

>735_bases
GTGACTGAAGTTTCCATGAGCCTCACTGGACACCTGAAAGAATTGCGAACCAGATTATTAATCATACTTCTATCCTTTTT
TCTCGCTTTCTTTGTGGGGCTTTTCGTTTCCAAGCCGTTAATTTTATTTCTCCAAAAAGATGACTTACCAAAAGAAGTGA
TTTTGCACGTTTTTAAAGTGACAGATGCTTTTCAAATCTATATCGAAATGGCGTTTGTTATCGGACTAGTCTTAGTATTT
CCAGTTATTTTATATCAATTATGGGCCTTCGTAAAACCCGGCTTACATGCATCCGAACAACGAATTACCCTGCGCTATAT
TCCGATTACTTTTTTACTTTTTTTATGTGGTGTCGTTTTTTCTTATGTAATTACTTTTCCATTTATTTTAAAATTTATGT
TCCAATTCGCGGCAGAACTTGGCGTTGAAACGACGATTGGCCTCGCAACTTATTTTCAATTTTTACTACAAATTGTGCTT
TCATTCGGTGTATTATTTGAACTTCCGATGGTGATTATGCTGTTAACGAGATTGTCACTGATAACACCAAACGGAATGCG
GCGCGCACGGAAATATGCTTACTTCTGCTTATTGATTATCGCTGCATTCATCGCTCCACCAGAAATCTTATCACATTTGA
TGGTTACCATTCCGCTCATAGGGCTGTATGAAATTAGCATTGTTGTGTCTGGTTTTACTGTGCGGCGAATGGATAAGGAA
ATGAAAACTGTCTAA

Upstream 100 bases:

>100_bases
TTGGTAGAGCTGCTGGAGACACTCTCCGCGAATTCAAAAATGCGACAAAAGGCATGATGGATGATTCAAAAGAAGAAACT
AAAAAAGAAGATTCACGCCC

Downstream 100 bases:

>100_bases
AATGAATTGTTAATACTAAAAGCTCGAAATCAAATTGATTTCGAGCTTTTCAAATTATCTGTACATTTATTTGAAAATTC
AATGTACCATGTTATATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTEVSMSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFLQKDDLPKEVILHVFKVTDAFQIYIEMAFVIGLVLVF
PVILYQLWAFVKPGLHASEQRITLRYIPITFLLFLCGVVFSYVITFPFILKFMFQFAAELGVETTIGLATYFQFLLQIVL
SFGVLFELPMVIMLLTRLSLITPNGMRRARKYAYFCLLIIAAFIAPPEILSHLMVTIPLIGLYEISIVVSGFTVRRMDKE
MKTV

Sequences:

>Translated_244_residues
MTEVSMSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFLQKDDLPKEVILHVFKVTDAFQIYIEMAFVIGLVLVF
PVILYQLWAFVKPGLHASEQRITLRYIPITFLLFLCGVVFSYVITFPFILKFMFQFAAELGVETTIGLATYFQFLLQIVL
SFGVLFELPMVIMLLTRLSLITPNGMRRARKYAYFCLLIIAAFIAPPEILSHLMVTIPLIGLYEISIVVSGFTVRRMDKE
MKTV
>Mature_243_residues
TEVSMSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFLQKDDLPKEVILHVFKVTDAFQIYIEMAFVIGLVLVFP
VILYQLWAFVKPGLHASEQRITLRYIPITFLLFLCGVVFSYVITFPFILKFMFQFAAELGVETTIGLATYFQFLLQIVLS
FGVLFELPMVIMLLTRLSLITPNGMRRARKYAYFCLLIIAAFIAPPEILSHLMVTIPLIGLYEISIVVSGFTVRRMDKEM
KTV

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. Required for ywbN secretion [H]

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=249, Percent_Identity=31.7269076305221, Blast_Score=130, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 27982; Mature: 27850

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS01218 TATC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVSMSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFLQKDDLPKEVILHVFKV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
TDAFQIYIEMAFVIGLVLVFPVILYQLWAFVKPGLHASEQRITLRYIPITFLLFLCGVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEHHHHHHHHHHHHHH
SYVITFPFILKFMFQFAAELGVETTIGLATYFQFLLQIVLSFGVLFELPMVIMLLTRLSL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITPNGMRRARKYAYFCLLIIAAFIAPPEILSHLMVTIPLIGLYEISIVVSGFTVRRMDKE
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKTV
HCCC
>Mature Secondary Structure 
TEVSMSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFLQKDDLPKEVILHVFKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
TDAFQIYIEMAFVIGLVLVFPVILYQLWAFVKPGLHASEQRITLRYIPITFLLFLCGVVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEHHHHHHHHHHHHHH
SYVITFPFILKFMFQFAAELGVETTIGLATYFQFLLQIVLSFGVLFELPMVIMLLTRLSL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITPNGMRRARKYAYFCLLIIAAFIAPPEILSHLMVTIPLIGLYEISIVVSGFTVRRMDKE
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKTV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377; 11007775 [H]