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The map label for this gene is abgA [H]

Identifier: 226222946

GI number: 226222946

Start: 341476

End: 342891

Strand: Reverse

Name: abgA [H]

Synonym: Lm4b_00338

Alternate gene names: 226222946

Gene position: 342891-341476 (Counterclockwise)

Preceding gene: 226222947

Following gene: 226222937

Centisome position: 11.77

GC content: 41.88

Gene sequence:

>1416_bases
ATGCATACAAATACAGGATTTCCAGCCAACTTTTTATGGGGTGGAGCTGCTGCTGCAAACCAATTCGAAGGCGCTTACAA
CGTCGATGGAAAAGGACTTTCCGTTCAAGATGTTACTCCAAAAGGCGGATTTGGTCACATTACTGACGGTCCAACACCAG
ATAACTTAAAATTAGAAGGAATTGACTTCTATCATCGCTACAAAGATGATGTGAAACTTTTTGCCGAAATGGGCTTCAAG
GTTTTCCGTACTTCCATCGCTTGGTCCCGTATCTTCCCAAATGGTGACGAAACTGAGCCAAACGAAGCAGGATTACAATT
TTACGATGATTTATTCGATGAACTTCTAGCACATAATATCGAACCACTGATTACTTTATCTCACTATGAAACACCACTTC
ACTTATCGAAAACTTACGACGGCTGGGTAAATAGAAAAATGATCGACTTCTATGAAAACTATGTCCGCACCGTATTTAAT
CGCTATAAAGGCAAAGTAAAATATTGGCTCACTTTCAATGAAATCAACTCCATTTTACACGCACCATTCATGAGCGGCGG
TATTTCTACAAGCCCAGATAAATTATCTCAAAAAGACTTATATCAAGCTGTCCACCACGAACTTGTGGCGAGCGCGCTGG
CTACAAAAATTGGTCACGAAATCATGCCCGAAGCCCAAATCGGCTGCATGGTCCTAGCAATGCCAACTTATCCGCTAACT
TCCAACCCAGATGATATTATTGCTGTTATGGAAGCAGAGCGCAAAAACTACTTCTTCTCCGACGTTCATGTCCGCGGAAC
TTATCCGGGCTACATGAAACGCTATTTCAGAGAAAATAATATTGAATTAGACGTAACAGAAGAAGACCTAGAAATCCTTA
AAAACACAGTAGATTTCATTTCCTTCAGCTATTACATGAGCACAACCGAAACAGCTGACGAGTCAAAACGCAAAGCTGGC
GCAGGAAACATCCTAGGCGGCGTGCAAAACCCTTACCTAGAAGCATCCGAATGGGGCTGGCAAATCGATCCTCAAGGCTT
GCGCGTTGTCCTAAACGAATTCTGGGATAGATACCAAAAACCACTTTTCATCGTAGAAAACGGTCTTGGCGCTATCGATC
AACTAGAAAAAGACGAAAACGGCAACTACACAGTAAATGATGACTACCGTATTAATTATTTGAGCGCTCATTTATCGCAA
GTGAAAGAAGCGATTAAAGATGGCGTTGACTTGATGGGTTACACTTCATGGGGCTGTATTGACCTTGTAAGTGCCTCCAC
TGCTGAAATGAAAAAACGTTACGGCTTTATCTATGTCGATCGCAACAACGACGGCACAGGTACGCTAAACCGTTATAAGA
AGAAAAGTTTTGATTGGTACAAGAACGTTATTGCTACCAATGGTGAAGATTTATAA

Upstream 100 bases:

>100_bases
ACCAAATATTTTTCTAAGTACCGTGTTTTTTTGCATGTATTTAGAAAAGTATTTGGTTTTTTTCATAGATACTTTAAAAT
GTAGAAAAGGAGTTTTTAAC

Downstream 100 bases:

>100_bases
AAATGAGAAACCCAGGTTTGCCCTTTTTAAGAGGGGTAACCTGGGTTTTTTAATTGCTTGATAACGGAGTAGCAATCATC
CGACCGAGTTATCGCTGAAA

Product: phospho-beta-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MHTNTGFPANFLWGGAAAANQFEGAYNVDGKGLSVQDVTPKGGFGHITDGPTPDNLKLEGIDFYHRYKDDVKLFAEMGFK
VFRTSIAWSRIFPNGDETEPNEAGLQFYDDLFDELLAHNIEPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFN
RYKGKVKYWLTFNEINSILHAPFMSGGISTSPDKLSQKDLYQAVHHELVASALATKIGHEIMPEAQIGCMVLAMPTYPLT
SNPDDIIAVMEAERKNYFFSDVHVRGTYPGYMKRYFRENNIELDVTEEDLEILKNTVDFISFSYYMSTTETADESKRKAG
AGNILGGVQNPYLEASEWGWQIDPQGLRVVLNEFWDRYQKPLFIVENGLGAIDQLEKDENGNYTVNDDYRINYLSAHLSQ
VKEAIKDGVDLMGYTSWGCIDLVSASTAEMKKRYGFIYVDRNNDGTGTLNRYKKKSFDWYKNVIATNGEDL

Sequences:

>Translated_471_residues
MHTNTGFPANFLWGGAAAANQFEGAYNVDGKGLSVQDVTPKGGFGHITDGPTPDNLKLEGIDFYHRYKDDVKLFAEMGFK
VFRTSIAWSRIFPNGDETEPNEAGLQFYDDLFDELLAHNIEPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFN
RYKGKVKYWLTFNEINSILHAPFMSGGISTSPDKLSQKDLYQAVHHELVASALATKIGHEIMPEAQIGCMVLAMPTYPLT
SNPDDIIAVMEAERKNYFFSDVHVRGTYPGYMKRYFRENNIELDVTEEDLEILKNTVDFISFSYYMSTTETADESKRKAG
AGNILGGVQNPYLEASEWGWQIDPQGLRVVLNEFWDRYQKPLFIVENGLGAIDQLEKDENGNYTVNDDYRINYLSAHLSQ
VKEAIKDGVDLMGYTSWGCIDLVSASTAEMKKRYGFIYVDRNNDGTGTLNRYKKKSFDWYKNVIATNGEDL
>Mature_471_residues
MHTNTGFPANFLWGGAAAANQFEGAYNVDGKGLSVQDVTPKGGFGHITDGPTPDNLKLEGIDFYHRYKDDVKLFAEMGFK
VFRTSIAWSRIFPNGDETEPNEAGLQFYDDLFDELLAHNIEPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFN
RYKGKVKYWLTFNEINSILHAPFMSGGISTSPDKLSQKDLYQAVHHELVASALATKIGHEIMPEAQIGCMVLAMPTYPLT
SNPDDIIAVMEAERKNYFFSDVHVRGTYPGYMKRYFRENNIELDVTEEDLEILKNTVDFISFSYYMSTTETADESKRKAG
AGNILGGVQNPYLEASEWGWQIDPQGLRVVLNEFWDRYQKPLFIVENGLGAIDQLEKDENGNYTVNDDYRINYLSAHLSQ
VKEAIKDGVDLMGYTSWGCIDLVSASTAEMKKRYGFIYVDRNNDGTGTLNRYKKKSFDWYKNVIATNGEDL

Specific function: Can Hydrolyze Salicin And Arbutin. [C]

COG id: COG2723

COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 1 family [H]

Homologues:

Organism=Homo sapiens, GI110681710, Length=487, Percent_Identity=29.9794661190965, Blast_Score=199, Evalue=7e-51,
Organism=Homo sapiens, GI32481206, Length=496, Percent_Identity=28.8306451612903, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI13273313, Length=485, Percent_Identity=25.5670103092783, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI28376633, Length=485, Percent_Identity=27.8350515463918, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI24497614, Length=484, Percent_Identity=26.4462809917355, Blast_Score=141, Evalue=2e-33,
Organism=Escherichia coli, GI2367270, Length=467, Percent_Identity=59.1006423982869, Blast_Score=571, Evalue=1e-164,
Organism=Escherichia coli, GI1789070, Length=474, Percent_Identity=53.1645569620253, Blast_Score=536, Evalue=1e-154,
Organism=Escherichia coli, GI2367174, Length=477, Percent_Identity=51.7819706498952, Blast_Score=507, Evalue=1e-145,
Organism=Caenorhabditis elegans, GI17552856, Length=483, Percent_Identity=30.4347826086957, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17539390, Length=445, Percent_Identity=30.561797752809, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI21356577, Length=465, Percent_Identity=27.3118279569892, Blast_Score=152, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001360
- InterPro:   IPR018120
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00232 Glyco_hydro_1 [H]

EC number: =3.2.1.86 [H]

Molecular weight: Translated: 53646; Mature: 53646

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTNTGFPANFLWGGAAAANQFEGAYNVDGKGLSVQDVTPKGGFGHITDGPTPDNLKLEG
CCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEC
IDFYHRYKDDVKLFAEMGFKVFRTSIAWSRIFPNGDETEPNEAGLQFYDDLFDELLAHNI
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
EPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFNRYKGKVKYWLTFNEINSILH
CCEEEEECCCCCEEECCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
APFMSGGISTSPDKLSQKDLYQAVHHELVASALATKIGHEIMPEAQIGCMVLAMPTYPLT
CHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
SNPDDIIAVMEAERKNYFFSDVHVRGTYPGYMKRYFRENNIELDVTEEDLEILKNTVDFI
CCCCCEEEEEEHHCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
SFSYYMSTTETADESKRKAGAGNILGGVQNPYLEASEWGWQIDPQGLRVVLNEFWDRYQK
EEHEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCEECHHHHHHHHHHHHHHHCC
PLFIVENGLGAIDQLEKDENGNYTVNDDYRINYLSAHLSQVKEAIKDGVDLMGYTSWGCI
CEEEEECCCCHHHHHHCCCCCCEEECCCCEEHHHHHHHHHHHHHHHCCCCEECCCCCCHH
DLVSASTAEMKKRYGFIYVDRNNDGTGTLNRYKKKSFDWYKNVIATNGEDL
HHHCCCHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHTNTGFPANFLWGGAAAANQFEGAYNVDGKGLSVQDVTPKGGFGHITDGPTPDNLKLEG
CCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEC
IDFYHRYKDDVKLFAEMGFKVFRTSIAWSRIFPNGDETEPNEAGLQFYDDLFDELLAHNI
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
EPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFNRYKGKVKYWLTFNEINSILH
CCEEEEECCCCCEEECCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
APFMSGGISTSPDKLSQKDLYQAVHHELVASALATKIGHEIMPEAQIGCMVLAMPTYPLT
CHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
SNPDDIIAVMEAERKNYFFSDVHVRGTYPGYMKRYFRENNIELDVTEEDLEILKNTVDFI
CCCCCEEEEEEHHCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
SFSYYMSTTETADESKRKAGAGNILGGVQNPYLEASEWGWQIDPQGLRVVLNEFWDRYQK
EEHEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCEECHHHHHHHHHHHHHHHCC
PLFIVENGLGAIDQLEKDENGNYTVNDDYRINYLSAHLSQVKEAIKDGVDLMGYTSWGCI
CEEEEECCCCHHHHHHCCCCCCEEECCCCEEHHHHHHHHHHHHHHHCCCCEECCCCCCHH
DLVSASTAEMKKRYGFIYVDRNNDGTGTLNRYKKKSFDWYKNVIATNGEDL
HHHCCCHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA