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The map label for this gene is yabM [H]

Identifier: 226222844

GI number: 226222844

Start: 217959

End: 219548

Strand: Direct

Name: yabM [H]

Synonym: Lm4b_00213

Alternate gene names: 226222844

Gene position: 217959-219548 (Clockwise)

Preceding gene: 226222843

Following gene: 226222845

Centisome position: 7.48

GC content: 41.51

Gene sequence:

>1590_bases
GTGCCAGAACGTTCCATGAAGCGACTAATGAAAGGAGCGGCTTGGCTAACCGCGGCCTCTCTTATTTCTAAAATACTTAG
CGCAGTTTACCGAGTACCCTTTCAAAATATGGTGGGGGATGTAGGGTTTTATATTTTCCAACAAGTATATCCGATATACG
GAATTGCAATGACCCTCGCACTCGGTGGATTCCCAGTTGTTATTTCTAAAATGTTAGCGGAGGCAGAAGGCGATGTAAGA
CGACAACAAATAATTATGCGCGCAGTCTCACGGATGCTCCGAATTGTAAGTATTGTGATTTTCGCCTTTTTATTCCTATT
TGCCAACCCGATTGCTATCATGATGGGAGACCCGGCATTATCTGAATTAATTCGGGTCATCAGTTTCGTGTTTTTACTTA
TGCCACAGCTTGCGTTTATGCGTGGCTTTTTCCAAGGAGAAGGTGACATGATTCCGACCGCAATCTCGCAAACAGTTGAG
CAAATTGTTCGAGTAGCTATTATTTTGATAGGTGCTGGCCTTGCACTTCATTTTAATTTTGATTTATATGATGCAGGTTC
AATGGCGATGAGTGGTGCCTTTTTCGGTGGGGTTTCCGGGATTTTCATTTTGCGTCATTTTTATAATAAAAAGGTAAGGC
TCGGGGAAGGGATTCAACCAGCAGTATTTACAAATAAAGAAGAAAAAGTAGGTATTGGCCGCACGTTCTTGCGACAAAGT
GTTGCAATTTGTGTAGTTAGCTCCATGCTGATTTTATTCCAATTAGTTGATTCTTTCCAAGTATATCGTTTAATGAGTGA
CTCAGGGATTCCGGATTTCATCGCTAAGTCGCTAAAAGGGGTATACGACCGCGGACAGCCAATCTTGCAATTAGGTTTAG
TCATCTCAACTGGACTTGCGCTCGCGCTTGTCCCAATGATTACTGCCGCAAGAGTTCAAAATCAACAAAAAGAACTAAAA
CGCTCCGTCTTATTAGCGATTAAGATTACATTAATTTTGGCAGGTGCAGAAACAATTGGACTCATAGTTATTATGCGTCC
GCTAAACCAAATGCTTTTCCAAACACCAGACGGCACATTCGTTTTACAATTATTTATGCCAGCTGTTTTCCTAAGCTCAC
TAATCATCATGTTAAGCAGTATTTTACAAGGTTTCGGGAAAATTACTGTACCTGCAGTTGGCGTTGGAATTGGACTTATT
GTAAAATGGGTAACAGGAGGCATTCTTATTCCGAGACTGGCAACAGTTGGTGCATCCGTTTCAACATGTGTTGGCTTACT
TGTGATTCTACTCATTTGTTACGTATCACTAAAACAAACAATCCGCGTGCCTTTCGTTGAAAAAACAATGTTGTTCCGGC
TAATTGCCGCTTTAGCGTTAATGGCTGTATTCCCGTGCCTATTTGAATGGTTAGCTCCACTCAATACAAGACTCGGTAGT
GCGTTCCAAGCAATTGTTAGTGCGTTAGTTGGCGGCGGGATTTTCCTTGTTTTTTCACTAAGATATAAATTACTCGGTCC
AAAAGATTTTGTTTTCCTTCCGTTTGGCTCCAAATTACTAGCGCTTAGTAAGCTGGTTGCACGGAAATAA

Upstream 100 bases:

>100_bases
ATACCAAGTCAAAAGTTTGGCTGAAAAACTTCGCGGAGCCATGAAAGAAAGAGCATCTGCAGAAAATTGATAAGTTATTA
AGAAGGAAGGAGGTGGCGGA

Downstream 100 bases:

>100_bases
TTAATATAAAGTAGGTGAATAAAATGGCTACAACCATGCGATTAGATAAATATTTAAAAGTATCTCGACTAATTAAAAGA
CGTACAGTAGCAAAAGAAGT

Product: Conserved membrane-spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MPERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVR
RQQIIMRAVSRMLRIVSIVIFAFLFLFANPIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVE
QIVRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQS
VAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQNQQKELK
RSVLLAIKITLILAGAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKITVPAVGVGIGLI
VKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLIAALALMAVFPCLFEWLAPLNTRLGS
AFQAIVSALVGGGIFLVFSLRYKLLGPKDFVFLPFGSKLLALSKLVARK

Sequences:

>Translated_529_residues
MPERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVR
RQQIIMRAVSRMLRIVSIVIFAFLFLFANPIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVE
QIVRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQS
VAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQNQQKELK
RSVLLAIKITLILAGAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKITVPAVGVGIGLI
VKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLIAALALMAVFPCLFEWLAPLNTRLGS
AFQAIVSALVGGGIFLVFSLRYKLLGPKDFVFLPFGSKLLALSKLVARK
>Mature_528_residues
PERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVRR
QQIIMRAVSRMLRIVSIVIFAFLFLFANPIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVEQ
IVRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQSV
AICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQNQQKELKR
SVLLAIKITLILAGAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKITVPAVGVGIGLIV
KWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLIAALALMAVFPCLFEWLAPLNTRLGSA
FQAIVSALVGGGIFLVFSLRYKLLGPKDFVFLPFGSKLLALSKLVARK

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 57769; Mature: 57638

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFAFLFLFANPIAIMMGDPAL
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHH
SELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVEQIVRVAIILIGAGLALHFNF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
DLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQS
CEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHCCHHHHHHHHH
VAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LALVPMITAARVQNQQKELKRSVLLAIKITLILAGAETIGLIVIMRPLNQMLFQTPDGTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH
VLQLFMPAVFLSSLIIMLSSILQGFGKITVPAVGVGIGLIVKWVTGGILIPRLATVGASV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
STCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLIAALALMAVFPCLFEWLAPLNTRLGS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFQAIVSALVGGGIFLVFSLRYKLLGPKDFVFLPFGSKLLALSKLVARK
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFAFLFLFANPIAIMMGDPAL
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHH
SELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVEQIVRVAIILIGAGLALHFNF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
DLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQS
CEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHCCHHHHHHHHH
VAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LALVPMITAARVQNQQKELKRSVLLAIKITLILAGAETIGLIVIMRPLNQMLFQTPDGTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH
VLQLFMPAVFLSSLIIMLSSILQGFGKITVPAVGVGIGLIVKWVTGGILIPRLATVGASV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
STCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLIAALALMAVFPCLFEWLAPLNTRLGS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFQAIVSALVGGGIFLVFSLRYKLLGPKDFVFLPFGSKLLALSKLVARK
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]