| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is malL [H]
Identifier: 226222813
GI number: 226222813
Start: 184567
End: 186228
Strand: Direct
Name: malL [H]
Synonym: Lm4b_00181
Alternate gene names: 226222813
Gene position: 184567-186228 (Clockwise)
Preceding gene: 226222812
Following gene: 226222814
Centisome position: 6.34
GC content: 37.97
Gene sequence:
>1662_bases ATGAAAGAAAAAGATTGGTGGAAAAAAAGCGTAGTGTACCAAATCTATCCAAAGAGTTTTAATGATTCGAATGGTGATGG AGTTGGTGATATTCAAGGAATTATCGAGAAATTAGATTATTTAAAAGAGCTAGGTGTGGACGTTATCTGGTTGTCCCCAG TATACGATTCGCCTCAAGATGACAATGGTTACGATATTCGCGATTATCAAAAAATTTACGAAGAGTATGGAGATATGGCG ACTTTTGATCAATTACTTCAAGGTTTACACGACCGCGAAATGAAACTTGTAATGGATCTTGTTGTTAACCATACTTCTGA TGAACACAAGTGGTTTGAGGAATCCAGAAAATCCAAAGACAACCCGTACAGAGATTACTATTTCTGGCGCGAGGAAAACG AAATCAATAACTGGGGCTCGATTTTCAGCGGTCCAGCATGGGAATTGGACGAAAAAACAGGTGAGTACTATTTACACCTG TTCTCCAAAAAACAACCTGATTTAAACTGGGAAAACCCTAAATTACGCCAAGATGTATATAATATGATGAAATTCTGGCT AGATAAAGGCATTGATGGCTTCCGCATGGACGTAATTAATTTTATTTCCAAAAATACTGATTTCCCAGATGGTCCAGTAC CAGATGGTCAAATTTATGGCGATGCTGGCAATGATTTTTGTAATGGACCGCGGATTCATGAGTTCTTGCAAGAAATGAAC CAAGAAGTTACTTCTAAATACGATGTGATGACTGTTGGCGAAATGCCTGGTGCTAGTACAACCGACGCGCAAATTTACAC GAATCCAGCAAATAATGAAGTCGATATGATTTTTACATTTGAACATATGAACTTAGATTCCGATGGCGACAATAAATGGG ATCTAAAACCAATCTACTTACCAGATTTAAAAGAAAATATGTCTGAATGGCAAGTGGCGCTTCAAGAAAACGGTTGGAAT AGCTTATATTGGAATAATCATGACCAACCGCGTATCGTTTCTCGTTTTGGGAATGACAATCGTTTCCGTGTTCGTTCAGC GAAAATGCTTGCAACTTGTTTGCATATGATGAAAGGAACGCCATATATTTATCAAGGTGAAGAAATTGGGATGACAAATG TTCATTTTGAAACGCTAGATGATTACCGTGATATCGAAACGCTAAACATGTACAAAGAGCGTAAGGAGCAAGGACACAGC CATGAAAGCATCATGCAGTCGATTTACACAAAAGGCCGTGACAATGCGAGAACGCCGTACCAGTGGGATAATAGCGAGAA TGCTGGCTTCACAACCGGAACGCCTTGGCTTAAAGTCAACCCGCGCTATACAGAAATCAACAACGAAGAAGCGCTGAAAA ACCCAGATTCCATTTTCTACTACTACCAAAATCTTATTAAGTTACGAAAAACGACTGAAATCATCACAACTGGTAATTAT CGTTTGTTATTACCTAAAGATGAAGCGATTTTCGCATATGAACGCTACACAGAAAATGAAAAATTAGTGGTTTTATGTAA TTTCACAGAAGAAGAACAAGTTATTTCTGATGAAAACATTTTGAACGAAATCCAAAAAGGTTCCGTGCTTGTAAACAATG TTCCTAATATTATAGAAGGAACTTTACGACCTTACGAAGCAATCGTTTATCAAATCAAGTAA
Upstream 100 bases:
>100_bases TGCTACCCATCAAGGTGAAGCAAACTTGCAACATAAAGTAACTACTATACAAGTTTTTGGAGAAAAAACAGACAAAATTA CAAGGGCGGGAATTTAATCT
Downstream 100 bases:
>100_bases ATCTCAGGAAAGCCACCAATTGCTAGGTGGCTTTTTTTGTATGCATCAAAAATTATAGTATAATAGAAGGAAATGATTTT ATTAGGAGGAATTCTCTTGC
Product: oligo-1,6-glucosidase
Products: NA
Alternate protein names: Dextrin 6-alpha-D-glucanohydrolase; Oligosaccharide alpha-1,6-glucosidase; Sucrase-isomaltase; Isomaltase [H]
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKELGVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMA TFDQLLQGLHDREMKLVMDLVVNHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQIYGDAGNDFCNGPRIHEFLQEMN QEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDMIFTFEHMNLDSDGDNKWDLKPIYLPDLKENMSEWQVALQENGWN SLYWNNHDQPRIVSRFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLDDYRDIETLNMYKERKEQGHS HESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEEALKNPDSIFYYYQNLIKLRKTTEIITTGNY RLLLPKDEAIFAYERYTENEKLVVLCNFTEEEQVISDENILNEIQKGSVLVNNVPNIIEGTLRPYEAIVYQIK
Sequences:
>Translated_553_residues MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKELGVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMA TFDQLLQGLHDREMKLVMDLVVNHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQIYGDAGNDFCNGPRIHEFLQEMN QEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDMIFTFEHMNLDSDGDNKWDLKPIYLPDLKENMSEWQVALQENGWN SLYWNNHDQPRIVSRFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLDDYRDIETLNMYKERKEQGHS HESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEEALKNPDSIFYYYQNLIKLRKTTEIITTGNY RLLLPKDEAIFAYERYTENEKLVVLCNFTEEEQVISDENILNEIQKGSVLVNNVPNIIEGTLRPYEAIVYQIK >Mature_553_residues MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKELGVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMA TFDQLLQGLHDREMKLVMDLVVNHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQIYGDAGNDFCNGPRIHEFLQEMN QEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDMIFTFEHMNLDSDGDNKWDLKPIYLPDLKENMSEWQVALQENGWN SLYWNNHDQPRIVSRFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLDDYRDIETLNMYKERKEQGHS HESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEEALKNPDSIFYYYQNLIKLRKTTEIITTGNY RLLLPKDEAIFAYERYTENEKLVVLCNFTEEEQVISDENILNEIQKGSVLVNNVPNIIEGTLRPYEAIVYQIK
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=534, Percent_Identity=30.3370786516854, Blast_Score=251, Evalue=2e-66, Organism=Escherichia coli, GI1790687, Length=550, Percent_Identity=45.2727272727273, Blast_Score=517, Evalue=1e-148, Organism=Escherichia coli, GI1786604, Length=363, Percent_Identity=24.5179063360882, Blast_Score=93, Evalue=5e-20, Organism=Caenorhabditis elegans, GI25147709, Length=523, Percent_Identity=25.6214149139579, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI32565753, Length=216, Percent_Identity=31.0185185185185, Blast_Score=114, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6321726, Length=586, Percent_Identity=40.4436860068259, Blast_Score=414, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6322245, Length=576, Percent_Identity=38.5416666666667, Blast_Score=410, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6324416, Length=586, Percent_Identity=39.9317406143345, Blast_Score=399, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6322241, Length=586, Percent_Identity=39.9317406143345, Blast_Score=399, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6322021, Length=586, Percent_Identity=39.9317406143345, Blast_Score=399, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6319776, Length=580, Percent_Identity=37.2413793103448, Blast_Score=365, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6321731, Length=580, Percent_Identity=37.0689655172414, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24583747, Length=559, Percent_Identity=34.1681574239714, Blast_Score=292, Evalue=4e-79, Organism=Drosophila melanogaster, GI24583749, Length=559, Percent_Identity=34.1681574239714, Blast_Score=292, Evalue=4e-79, Organism=Drosophila melanogaster, GI221330053, Length=587, Percent_Identity=32.7086882453152, Blast_Score=281, Evalue=9e-76, Organism=Drosophila melanogaster, GI24586593, Length=586, Percent_Identity=32.0819112627986, Blast_Score=281, Evalue=9e-76, Organism=Drosophila melanogaster, GI24583745, Length=562, Percent_Identity=33.4519572953737, Blast_Score=274, Evalue=9e-74, Organism=Drosophila melanogaster, GI45549022, Length=542, Percent_Identity=30.8118081180812, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI24586599, Length=545, Percent_Identity=31.1926605504587, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24586597, Length=539, Percent_Identity=32.0964749536178, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24586587, Length=534, Percent_Identity=30.7116104868914, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI24586589, Length=567, Percent_Identity=31.7460317460317, Blast_Score=241, Evalue=9e-64, Organism=Drosophila melanogaster, GI24586591, Length=518, Percent_Identity=31.8532818532818, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI281360393, Length=531, Percent_Identity=29.0018832391714, Blast_Score=202, Evalue=6e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =3.2.1.10 [H]
Molecular weight: Translated: 65138; Mature: 65138
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKELGVDVIWLSPVYDSPQD CCCHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC DNGYDIRDYQKIYEEYGDMATFDQLLQGLHDREMKLVMDLVVNHTSDEHKWFEESRKSKD CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHLFSKKQPDLNWENPKLRQDVY CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH NMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQIYGDAGNDFCNGPRIHEFLQEMN HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHH QEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDMIFTFEHMNLDSDGDNKWDLKPIYL HHHHCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEC PDLKENMSEWQVALQENGWNSLYWNNHDQPRIVSRFGNDNRFRVRSAKMLATCLHMMKGT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHCCC PYIYQGEEIGMTNVHFETLDDYRDIETLNMYKERKEQGHSHESIMQSIYTKGRDNARTPY CEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC QWDNSENAGFTTGTPWLKVNPRYTEINNEEALKNPDSIFYYYQNLIKLRKTTEIITTGNY CCCCCCCCCCCCCCCEEEECCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCE RLLLPKDEAIFAYERYTENEKLVVLCNFTEEEQVISDENILNEIQKGSVLVNNVPNIIEG EEEECCCCEEEEEHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHH TLRPYEAIVYQIK CCCCCEEEEEECC >Mature Secondary Structure MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKELGVDVIWLSPVYDSPQD CCCHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC DNGYDIRDYQKIYEEYGDMATFDQLLQGLHDREMKLVMDLVVNHTSDEHKWFEESRKSKD CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHLFSKKQPDLNWENPKLRQDVY CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH NMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQIYGDAGNDFCNGPRIHEFLQEMN HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHH QEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDMIFTFEHMNLDSDGDNKWDLKPIYL HHHHCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEC PDLKENMSEWQVALQENGWNSLYWNNHDQPRIVSRFGNDNRFRVRSAKMLATCLHMMKGT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHCCC PYIYQGEEIGMTNVHFETLDDYRDIETLNMYKERKEQGHSHESIMQSIYTKGRDNARTPY CEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC QWDNSENAGFTTGTPWLKVNPRYTEINNEEALKNPDSIFYYYQNLIKLRKTTEIITTGNY CCCCCCCCCCCCCCCEEEECCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCE RLLLPKDEAIFAYERYTENEKLVVLCNFTEEEQVISDENILNEIQKGSVLVNNVPNIIEG EEEECCCCEEEEEHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHH TLRPYEAIVYQIK CCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120057; 8370659; 9193006 [H]