Click here to switch to the map view.

The map label for this gene is inlJ [H]

Identifier: 226222804

GI number: 226222804

Start: 169991

End: 171256

Strand: Reverse

Name: inlJ [H]

Synonym: Lm4b_00172

Alternate gene names: 226222804

Gene position: 171256-169991 (Counterclockwise)

Preceding gene: 226222829

Following gene: 226222801

Centisome position: 5.88

GC content: 38.07

Gene sequence:

>1266_bases
ATGTTTAATAAGAAAAAAACTATCGCTAGCCTTATAGTTTTAAGTTCTCTAGCTAGTCAAATAGCACTTACACCTATTGC
TGCACTTGCGGATACTCACGATACAAATAATATTGCATTACTACAAAATACCAATGAGAATGTCCCATATAAATACACAT
CCACTCTTACATTTCCAACTTTAACGAATCAAACCCAGGAAGACTATAAACTGGAAATAAAATTAGCCCTACCAACTGGC
ATGAACTATACGGGCTTGCAGGTTTCTGTTGGTGGGGAAGACATTACAAACCAAGTTGGGACAACTAGCTTTGACAATTC
CACTAACACTGTTACTTTTAAATTCGACAAAGTAACAAGTTGGGATAGTTTATCCAAAGCAAAAGTAAAGTTCGACTGGA
AAACTTCTTATTCAGGTGAAGGCGGGGAAGCAAAAATCGATTCTTTAGTTGCGACCGCAACAGCTACAAGCGAAGACAAA
GCTGGTAACAAATCTACCTCTACTGGCTCTTTAAAACCAAAAGATATTAGCGCACCAGTTGTCAAAGCAGATAAAACAGA
GGTTACGTATAATCTTGGAAGCAACGTTACCGAAGAGCAATTTTTAACAGACATTAATGCTAGCGTTACTGATAATTATG
ACTCCACTATTAGTCTTACAAGCAATTTTACTTCCATAGTTAATCTAGCAGTGAGTGGTGATTACTCGGTCAATGTTCAA
GCAACCGATAAAGCTGGCAACGTCTCAAATACTGTAAATGTCACCGTTCATGTAGCAACTCCGGCACCTGTAGCCGGAGC
GAACATAACGGTCAACTATCTTGATAGCGATGGAAATAAACTCGCAGAATCAGACACATTGACGGGAACTATCGATAGTA
ATTACCAATCTACAAGTAAAAAAATTAGCGGGTACACTCTAGAAACCACACCAAAAAATGCAACTGGTACTTTCACTGAT
ACCCCGCAAACCGTTGATTATATTTATAAAAAAGATACCGTTACCCCAACACCTATAGTTGATCCGGTCAATCCAGTTGA
CCCGGTTGACCCAGTAAATCCGGTTGATCCAGTTGACCCTGTAGTAAATAAACCAGTCATTGTGACACCAAATACGGATC
AAGTTACTACTAGTAATTCAGTAGAAAAAACAACTTATAATTCTTTACCGAAAACGGGTGATACAGATCAAAGTACAGCA
ACAACTATTTTCGGAGCATTGCTTCTTTTAATCAGCGCCCCATTACTTTTATTTAAAAAGAAATAA

Upstream 100 bases:

>100_bases
TACCATATTAATGCTACTAGAATTAAACTAACGCCCCAAAATCGAGTGCTATACTTTAATTACATTAAATTCCAATTCAA
GGAAAGAGGTTATTTAAATA

Downstream 100 bases:

>100_bases
CTAAAATCACCTCGTAAAATTTTTACGAGGTGATTTAAAAATAGTCCTATTACAATACAAAAAGTGTAAGTGTTTTTATT
TTTATATACAAGAAAGCTAA

Product: peptidoglycan bound protein (LPXTG motif)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MFNKKKTIASLIVLSSLASQIALTPIAALADTHDTNNIALLQNTNENVPYKYTSTLTFPTLTNQTQEDYKLEIKLALPTG
MNYTGLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDK
AGNKSTSTGSLKPKDISAPVVKADKTEVTYNLGSNVTEEQFLTDINASVTDNYDSTISLTSNFTSIVNLAVSGDYSVNVQ
ATDKAGNVSNTVNVTVHVATPAPVAGANITVNYLDSDGNKLAESDTLTGTIDSNYQSTSKKISGYTLETTPKNATGTFTD
TPQTVDYIYKKDTVTPTPIVDPVNPVDPVDPVNPVDPVDPVVNKPVIVTPNTDQVTTSNSVEKTTYNSLPKTGDTDQSTA
TTIFGALLLLISAPLLLFKKK

Sequences:

>Translated_421_residues
MFNKKKTIASLIVLSSLASQIALTPIAALADTHDTNNIALLQNTNENVPYKYTSTLTFPTLTNQTQEDYKLEIKLALPTG
MNYTGLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDK
AGNKSTSTGSLKPKDISAPVVKADKTEVTYNLGSNVTEEQFLTDINASVTDNYDSTISLTSNFTSIVNLAVSGDYSVNVQ
ATDKAGNVSNTVNVTVHVATPAPVAGANITVNYLDSDGNKLAESDTLTGTIDSNYQSTSKKISGYTLETTPKNATGTFTD
TPQTVDYIYKKDTVTPTPIVDPVNPVDPVDPVNPVDPVDPVVNKPVIVTPNTDQVTTSNSVEKTTYNSLPKTGDTDQSTA
TTIFGALLLLISAPLLLFKKK
>Mature_421_residues
MFNKKKTIASLIVLSSLASQIALTPIAALADTHDTNNIALLQNTNENVPYKYTSTLTFPTLTNQTQEDYKLEIKLALPTG
MNYTGLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDK
AGNKSTSTGSLKPKDISAPVVKADKTEVTYNLGSNVTEEQFLTDINASVTDNYDSTISLTSNFTSIVNLAVSGDYSVNVQ
ATDKAGNVSNTVNVTVHVATPAPVAGANITVNYLDSDGNKLAESDTLTGTIDSNYQSTSKKISGYTLETTPKNATGTFTD
TPQTVDYIYKKDTVTPTPIVDPVNPVDPVDPVNPVDPVDPVVNKPVIVTPNTDQVTTSNSVEKTTYNSLPKTGDTDQSTA
TTIFGALLLLISAPLLLFKKK

Specific function: Involved in several steps of L.monocytogenes infection [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014755
- InterPro:   IPR009459
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF06458 MucBP [H]

EC number: NA

Molecular weight: Translated: 44850; Mature: 44850

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50847 GRAM_POS_ANCHORING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKKKTIASLIVLSSLASQIALTPIAALADTHDTNNIALLQNTNENVPYKYTSTLTFPT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEECC
LTNQTQEDYKLEIKLALPTGMNYTGLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTS
CCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEEEECCCC
WDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTSTGSLKPKDISAPV
CCCCCCEEEEEEEEECCCCCCCCEEHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE
VKADKTEVTYNLGSNVTEEQFLTDINASVTDNYDSTISLTSNFTSIVNLAVSGDYSVNVQ
EECCCCEEEEECCCCCCHHHHHHHCCCEECCCCCCEEEEECCCEEEEEEEECCCEEEEEE
ATDKAGNVSNTVNVTVHVATPAPVAGANITVNYLDSDGNKLAESDTLTGTIDSNYQSTSK
ECCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCEECCCCCEEEEECCCCCHHHH
KISGYTLETTPKNATGTFTDTPQTVDYIYKKDTVTPTPIVDPVNPVDPVDPVNPVDPVDP
HHCCEEEECCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
VVNKPVIVTPNTDQVTTSNSVEKTTYNSLPKTGDTDQSTATTIFGALLLLISAPLLLFKK
HHCCCEEEECCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEC
K
C
>Mature Secondary Structure
MFNKKKTIASLIVLSSLASQIALTPIAALADTHDTNNIALLQNTNENVPYKYTSTLTFPT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEECC
LTNQTQEDYKLEIKLALPTGMNYTGLQVSVGGEDITNQVGTTSFDNSTNTVTFKFDKVTS
CCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEEEECCCC
WDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTSTGSLKPKDISAPV
CCCCCCEEEEEEEEECCCCCCCCEEHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE
VKADKTEVTYNLGSNVTEEQFLTDINASVTDNYDSTISLTSNFTSIVNLAVSGDYSVNVQ
EECCCCEEEEECCCCCCHHHHHHHCCCEECCCCCCEEEEECCCEEEEEEEECCCEEEEEE
ATDKAGNVSNTVNVTVHVATPAPVAGANITVNYLDSDGNKLAESDTLTGTIDSNYQSTSK
ECCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCEECCCCCEEEEECCCCCHHHH
KISGYTLETTPKNATGTFTDTPQTVDYIYKKDTVTPTPIVDPVNPVDPVDPVNPVDPVDP
HHCCEEEECCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
VVNKPVIVTPNTDQVTTSNSVEKTTYNSLPKTGDTDQSTATTIFGALLLLISAPLLLFKK
HHCCCEEEECCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]