| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is guaB [H]
Identifier: 226222771
GI number: 226222771
Start: 137504
End: 139012
Strand: Reverse
Name: guaB [H]
Synonym: Lm4b_00136
Alternate gene names: 226222771
Gene position: 139012-137504 (Counterclockwise)
Preceding gene: 226222786
Following gene: 226222769
Centisome position: 4.77
GC content: 42.41
Gene sequence:
>1509_bases ATGGCATTTTATTTTGAAGAACCGTCCCGCACATTTAGTGAATTTTTACTTGTCCCAGGCTACTCATCCGCTGAATGTGT TCCAACAAATGTTAGCTTAAAAACACCAATCGTAAAATTTAAAAAAGGGGAAGAATCTGCTATCACAATGAACATTCCGC TTGTTTCCGCAATTATGCAAGCTGTTTCTGATGATAATATGGGGATTGCGCTTGCGACAGAAGGTGGCGTATCATTCATC TTCGGCTCCCAGTCCATCGAAAGTGAAGCTGCAATGGTTTCTCGCGTGAAAAATCATAAAGCTGGTTTCGTTATTAGTGA TTCCAACATCAGCCCTGACAAAACACTTCAAGACATCCTTGATTTAAAAGAAAAAACGGGTCATTCTACAGTAGCAGTTA CAGAAGACGGCACAGCGCACGGTAAATTACTTGGAATCGTGACAAGTCGCGACTACCGCGTAACGCGCATGAGCCCTGAT GAAAAAGTAGCAGATTTCATGACTCCTTTCGAAAAATTAGTTACTGCTAACAAATCGACCACTTTAAAAGAAGCTAACAA CATTATTTGGGACAACAAATTAAATGCCCTACCACTTGTAGACGATAACGAGCACCTAGTCCATATGGTATTCCGCAAAG ACTATGACTCTAATAAAGAAAATAAATTAGAACTACTTGATTCCTCCAAACGTTACGTTGTTGGAGCTGGTATTAACACG CGCGACTACGAAGAACGTGTTCCCGCTCTAGTTGAAGCTGGCGCAGATATTCTGTGTATCGATTCCTCTGAGGGTTACTC CGAATGGCAAAAACGCACACTTGACTATGTTCGCGGTAAATACGGCGATACGGTCAAAGTTGGCGCAGGGAATGTTGTTG ACCGCGATGGTTTCCGTTATCTTGCAGAAGCTGGCGCAGATTTCGTTAAAGTTGGCGTTGGTGGTGGTTCCATTTGTATC ACGCGTGAACAAAAAGGTATCGGACGCGGGCAAGCAACTGCACTAATTGATGTGGCTAAAGCACGCGATGAATATTTTGA AGAAACAGGTGTATATATTCCAATTTGTTCTGATGGTGGAATTGTTTATGACTACCACATGACGCTAGCTCTAGCAATGG GCGCTGACTTTATCATGCTTGGTCGTTATTTCTCTCGTTTTGACGAAAGTCCTACTAATAAAGTGAATTTAAACGGCACG TATATGAAAGAATATTGGGGTGAAGGAGCTAACCGCGCGCGCAACTGGCAACGTTATGACCTTGGCGGCGACAAGAAATT ATCTTTTGAAGAAGGCGTAGATTCTTATGTTCCTTACGCTGGATCTTTGAAAGACAATGTTGCCATCAGCCTTAGCAAAG TACGCTCTACTATGTGTAACTGCGGCGCGCTCAATATCCCTGAATTACAACAAAAAGCAAAAATCACCCTTGTTTCGTCC ACTTCTATCGTAGAAGGCGGCGCGCATGATGTGGTTGTAAAAGATGCTTCAAATAATTTAATCAAATAA
Upstream 100 bases:
>100_bases GTCCGAAAAAGCTCCCCCAATCATTGACTTTCCATCCAGTTATTGAAATAATAAAGATATTTTATAAATTCATTTAAAAA TAGAAGAAGGAGTGGAAATA
Downstream 100 bases:
>100_bases AATAAAATTGGTTGGTGTGAATTTGGTAAATTACCATTCTCACACCAACCAATTTTTTATTTATACATCTTACACAAAGG AATATTTTTCTTTAATATCT
Product: inosine 5-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVSFI FGSQSIESEAAMVSRVKNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPD EKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSNKENKLELLDSSKRYVVGAGINT RDYEERVPALVEAGADILCIDSSEGYSEWQKRTLDYVRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICI TREQKGIGRGQATALIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFSRFDESPTNKVNLNGT YMKEYWGEGANRARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVAISLSKVRSTMCNCGALNIPELQQKAKITLVSS TSIVEGGAHDVVVKDASNNLIK
Sequences:
>Translated_502_residues MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVSFI FGSQSIESEAAMVSRVKNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPD EKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSNKENKLELLDSSKRYVVGAGINT RDYEERVPALVEAGADILCIDSSEGYSEWQKRTLDYVRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICI TREQKGIGRGQATALIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFSRFDESPTNKVNLNGT YMKEYWGEGANRARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVAISLSKVRSTMCNCGALNIPELQQKAKITLVSS TSIVEGGAHDVVVKDASNNLIK >Mature_501_residues AFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVSFIF GSQSIESEAAMVSRVKNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPDE KVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSNKENKLELLDSSKRYVVGAGINTR DYEERVPALVEAGADILCIDSSEGYSEWQKRTLDYVRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICIT REQKGIGRGQATALIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFSRFDESPTNKVNLNGTY MKEYWGEGANRARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVAISLSKVRSTMCNCGALNIPELQQKAKITLVSST SIVEGGAHDVVVKDASNNLIK
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI34328928, Length=491, Percent_Identity=33.6048879837067, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI34328930, Length=491, Percent_Identity=33.6048879837067, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI217035146, Length=491, Percent_Identity=33.6048879837067, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI156616279, Length=491, Percent_Identity=33.6048879837067, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI217035152, Length=492, Percent_Identity=33.739837398374, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI217035148, Length=491, Percent_Identity=32.9938900203666, Blast_Score=235, Evalue=9e-62, Organism=Homo sapiens, GI66933016, Length=493, Percent_Identity=32.4543610547667, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI217035150, Length=491, Percent_Identity=31.7718940936864, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI156104880, Length=237, Percent_Identity=32.9113924050633, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI50541956, Length=255, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI50541954, Length=255, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI50541952, Length=255, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI50541948, Length=255, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=6e-21, Organism=Escherichia coli, GI1788855, Length=497, Percent_Identity=36.2173038229376, Blast_Score=228, Evalue=9e-61, Organism=Escherichia coli, GI1786293, Length=253, Percent_Identity=30.4347826086957, Blast_Score=96, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71994385, Length=510, Percent_Identity=30.7843137254902, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71994389, Length=425, Percent_Identity=33.1764705882353, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17560440, Length=284, Percent_Identity=27.8169014084507, Blast_Score=103, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323585, Length=500, Percent_Identity=32.8, Blast_Score=223, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6323464, Length=501, Percent_Identity=33.7325349301397, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6322012, Length=501, Percent_Identity=33.3333333333333, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6319352, Length=355, Percent_Identity=35.7746478873239, Blast_Score=181, Evalue=3e-46, Organism=Drosophila melanogaster, GI24641071, Length=474, Percent_Identity=34.1772151898734, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24641073, Length=474, Percent_Identity=34.1772151898734, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI28571163, Length=426, Percent_Identity=34.5070422535211, Blast_Score=207, Evalue=9e-54,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 55038; Mature: 54907
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGEESAITMNIPLVSAIMQ CCEEECCCHHHHHHEEEECCCCCCCEEECCCEECCCEEEEECCCCCEEEEECHHHHHHHH AVSDDNMGIALATEGGVSFIFGSQSIESEAAMVSRVKNHKAGFVISDSNISPDKTLQDIL HHCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH DLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPDEKVADFMTPFEKLVTANKST HHHHHCCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCC TLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSNKENKLELLDSSKRYVVGAGINT CHHHHCCEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCEEHEECCCCCEEEECCCCC RDYEERVPALVEAGADILCIDSSEGYSEWQKRTLDYVRGKYGDTVKVGAGNVVDRDGFRY CCHHHHCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHH LAEAGADFVKVGVGGGSICITREQKGIGRGQATALIDVAKARDEYFEETGVYIPICSDGG HHHCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC IVYDYHMTLALAMGADFIMLGRYFSRFDESPTNKVNLNGTYMKEYWGEGANRARNWQRYD EEEEHHHEEHHHHCCCHHHHHHHHHHHCCCCCCEEECCCEEHHHHHCCCCHHHCCCEEEC LGGDKKLSFEEGVDSYVPYAGSLKDNVAISLSKVRSTMCNCGALNIPELQQKAKITLVSS CCCCCCCCHHHCCHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHCCCEEEEEEC TSIVEGGAHDVVVKDASNNLIK CCEECCCCCEEEEECCCCCCCC >Mature Secondary Structure AFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGEESAITMNIPLVSAIMQ CEEECCCHHHHHHEEEECCCCCCCEEECCCEECCCEEEEECCCCCEEEEECHHHHHHHH AVSDDNMGIALATEGGVSFIFGSQSIESEAAMVSRVKNHKAGFVISDSNISPDKTLQDIL HHCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH DLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPDEKVADFMTPFEKLVTANKST HHHHHCCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCC TLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSNKENKLELLDSSKRYVVGAGINT CHHHHCCEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCEEHEECCCCCEEEECCCCC RDYEERVPALVEAGADILCIDSSEGYSEWQKRTLDYVRGKYGDTVKVGAGNVVDRDGFRY CCHHHHCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHH LAEAGADFVKVGVGGGSICITREQKGIGRGQATALIDVAKARDEYFEETGVYIPICSDGG HHHCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC IVYDYHMTLALAMGADFIMLGRYFSRFDESPTNKVNLNGTYMKEYWGEGANRARNWQRYD EEEEHHHEEHHHHCCCHHHHHHHHHHHCCCCCCEEECCCEEHHHHHCCCCHHHCCCEEEC LGGDKKLSFEEGVDSYVPYAGSLKDNVAISLSKVRSTMCNCGALNIPELQQKAKITLVSS CCCCCCCCHHHCCHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHCCCEEEEEEC TSIVEGGAHDVVVKDASNNLIK CCEECCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]