Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

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The map label for this gene is yybM [H]

Identifier: 226222672

GI number: 226222672

Start: 36870

End: 37634

Strand: Reverse

Name: yybM [H]

Synonym: Lm4b_00036

Alternate gene names: 226222672

Gene position: 37634-36870 (Counterclockwise)

Preceding gene: 226222673

Following gene: 226222671

Centisome position: 1.29

GC content: 30.2

Gene sequence:

>765_bases
ATGAAAAATCAGTTTACCTACTTAATTAACAATAAAACTACTCAAGGGATGTTCATTTTAATCTTATTTATACCTTGTAT
TGAAATCGTTCAATTATACATAATGTTAAAGCCAGATGCAGTTAATATTCATCCTGCTTTTGCATTTTTTCTTGCAGGTT
CAAGCCGAGGTCATATCACTCAAATATTATTACTTTGGTTCTTAACTGTTTTAAGTCTGTTACTCGGAGCAGACTCGCCC
ATTCAGGAATATCAGACAGGAGTTCGTAATATTATTATTAATAAAATAGGGAAAAAAGCTTATATTCTTCAAAAATTAGC
TGTAAGTTTTATTCTTTGTTTTATCACCATGCTTACAACTTTATTATTAAATTTTATTTTAGTTTCTATTGTATTCTTAG
GTGGCACTTATAAAATGGGGTTAAATGGATTAGGATCGCTTAATACTCTATTTGATTTTAGCATTCAAAACCCCTACTTA
GCAGATTTTGGTTTTGGATTTATGGCTTGCTTAATGGCCGGAATGGCTGGACTTATCGCTACTAGCTCCAGTCTGTTCTT
TTTGAATAAAAAATTTGCGTATCCAGCTGCATTTTTTATTTGGTTTCTGATGATACTTCCAAACAATTCAATTATGTTTA
TTTTCCAACCTTTTACAGAATATGGCTTTGAAATAATTTTGCCTATTTTTCTAGTTTTCAGTTTAATAGTTTTGATAATT
GTTGGTGTCCTTTACTTATATGAGGTGAAATATGTTAAAGAGTAG

Upstream 100 bases:

>100_bases
GATGGTATTTGGGATGAGGAAACTTGGTAATTATTCTAACCAGGAAAGGGATGTATTTAACTCCCTTTCCTTTTTAAAAT
AACGAAACGGAGTACATAAA

Downstream 100 bases:

>100_bases
ATATTTTCTTCTAATTTTTTCCATGTTCCTCTTTTTTTCTGTTTTTTGGTTCACACAAAACATGGAGTACCTAAGTTTCC
CTAAAAACAGAGAACTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKNQFTYLINNKTTQGMFILILFIPCIEIVQLYIMLKPDAVNIHPAFAFFLAGSSRGHITQILLLWFLTVLSLLLGADSP
IQEYQTGVRNIIINKIGKKAYILQKLAVSFILCFITMLTTLLLNFILVSIVFLGGTYKMGLNGLGSLNTLFDFSIQNPYL
ADFGFGFMACLMAGMAGLIATSSSLFFLNKKFAYPAAFFIWFLMILPNNSIMFIFQPFTEYGFEIILPIFLVFSLIVLII
VGVLYLYEVKYVKE

Sequences:

>Translated_254_residues
MKNQFTYLINNKTTQGMFILILFIPCIEIVQLYIMLKPDAVNIHPAFAFFLAGSSRGHITQILLLWFLTVLSLLLGADSP
IQEYQTGVRNIIINKIGKKAYILQKLAVSFILCFITMLTTLLLNFILVSIVFLGGTYKMGLNGLGSLNTLFDFSIQNPYL
ADFGFGFMACLMAGMAGLIATSSSLFFLNKKFAYPAAFFIWFLMILPNNSIMFIFQPFTEYGFEIILPIFLVFSLIVLII
VGVLYLYEVKYVKE
>Mature_254_residues
MKNQFTYLINNKTTQGMFILILFIPCIEIVQLYIMLKPDAVNIHPAFAFFLAGSSRGHITQILLLWFLTVLSLLLGADSP
IQEYQTGVRNIIINKIGKKAYILQKLAVSFILCFITMLTTLLLNFILVSIVFLGGTYKMGLNGLGSLNTLFDFSIQNPYL
ADFGFGFMACLMAGMAGLIATSSSLFFLNKKFAYPAAFFIWFLMILPNNSIMFIFQPFTEYGFEIILPIFLVFSLIVLII
VGVLYLYEVKYVKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28717; Mature: 28717

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQFTYLINNKTTQGMFILILFIPCIEIVQLYIMLKPDAVNIHPAFAFFLAGSSRGHIT
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHH
QILLLWFLTVLSLLLGADSPIQEYQTGVRNIIINKIGKKAYILQKLAVSFILCFITMLTT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLLNFILVSIVFLGGTYKMGLNGLGSLNTLFDFSIQNPYLADFGFGFMACLMAGMAGLIA
HHHHHHHHHHHHHCCCCEECCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH
TSSSLFFLNKKFAYPAAFFIWFLMILPNNSIMFIFQPFTEYGFEIILPIFLVFSLIVLII
CCCCEEEEEHHHCHHHHHHHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHH
VGVLYLYEVKYVKE
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKNQFTYLINNKTTQGMFILILFIPCIEIVQLYIMLKPDAVNIHPAFAFFLAGSSRGHIT
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHH
QILLLWFLTVLSLLLGADSPIQEYQTGVRNIIINKIGKKAYILQKLAVSFILCFITMLTT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLLNFILVSIVFLGGTYKMGLNGLGSLNTLFDFSIQNPYLADFGFGFMACLMAGMAGLIA
HHHHHHHHHHHHHCCCCEECCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH
TSSSLFFLNKKFAYPAAFFIWFLMILPNNSIMFIFQPFTEYGFEIILPIFLVFSLIVLII
CCCCEEEEEHHHCHHHHHHHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHH
VGVLYLYEVKYVKE
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377 [H]