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Identifier: 225869494

GI number:

Start: 5337

End: 8831

Strand: Direct

Name: Not Available

Synonym: SEQ_0007

Alternate gene names: NA

Gene position: NA

Preceding gene: 225869493

Following gene: 225869495

Centisome position: NA

GC content: NA

Gene sequence:

>3495_bases
ATGGATATTTTAGAATTATTTAATCAAAACAAGTCAATCCAGACCTGGCAATGTGATGTAACAAGCTTAAAACGGCAATT
AGTCATGGGCTTGTCAGGCTCAAGTAAAGCAGCAGCCATTGCCTCAGCCTATCTTAGCTTTCAAGGGAAGCTGGTCGTGG
TGACATCAACTCAAAATGACATGGAAAAATTAGCTGGTGATTTGTCAGCCTTGCTTGATGAGGGCTCTATTTTTCAATTT
TTTGCAGATGATACTGCTGCGGCTGAGTTTATTTTCTCCTCTATGGATAAAACAATCTCGAGAATAGAGGCACTAGCTTT
TTTATCAAATCCAGAAGCAAGAGGAATATTGGTCATTAGCTTAGCAGGACTCAGAATCCTACTTCCAAGTCCTAAGACTT
TTCAGCAGGGGCAGATTGACTTAGCAGTAGGAGTTGACACTGATCTTGACAACGTTGTCAAGAAGCTTGTCAAAATTGGT
TATCAAAGGGTGGCTCAGGTCCTTAGTCCTGGTGAATTTAGCAGACGAGGTGATATTTTAGATGTTTACGAGGTAACACA
GGACTTACCTGTTCGCATCGAATTTTTTGGTGATGAGATTGATGGTATTAGGAGCTTTGATATAGAAAGTCAAAAATCTC
TCCAAAAGAAGGATAGCACCAGTATCAAGCCTGCAAGTGATATGATTTTTGAGCCGGAGGATTTTGATAGGGCTAGTCAT
AATCTTGAAAAGCAGCTTCAACTTGCTAAGGCAGAACATAAAGGCTATCTGGAGGAGTTGCTCACTGTAACAAAAGAAGG
CCTGAAGCATAAGGACATCCGTAAATTTCAATCACTGTTTTATGATAATGAATGGACGATTCTAGATTACCTTCCTAAGG
GAACACCAGTATTTTTTGATGATTTCCAAAAGTTAGTTGACAGAAATGCTAAATTTGACTTAGAGCTTGCTCATTTGTTG
ACAGATGATTTACAGCAAGGAAAGTCACTTCCATTTCTCCATTATTTTGCTGACAATTATCGTGAGCTGCGACACTATAA
GCCTGCCACCTTCTTTTCAAATTTTCACAAGGGACTTGGTAATATTAAATTTGATAAGGTGTATAGCTTAACACAGTATG
CCATGCAGGAATTTTTCAATCAATTTCCACTGCTCATTGATGAGATTAAGCGGTATCAAAAATCTGGAGCAACTGTCCTT
TTACAGGTTGAATCTCATCAAGCTTATGAGCGGTTGGCAAAATCTCTTGAGGCTTATCAATGTCAATTGCCCCTTGTTTC
TGCTGATGCAATAGTATTACATCAAGCACAAATCATTATTGGTCACCTAGCAGGTGGGTTTTACTTTGCTGATGAAAAAT
TAGTTTTAATTACTGAGCATGAGATATATCATAAGAGGCTGAAGCGTCGTGCTCGTCGTACTAATATGAGTAATGCTGAA
CGCTTAAAGGATTACAATGAATTGTCTAAGGGTGATTATGTGGTCCACAGTGTGCATGGGATTGGTCGTTTTTTAGGCAT
TGAAACGATTAACATACAAGGGGTACATCGAGATTATGTCACCATTCAGTATCAGCAGTCAGATCGAATTTCTTTGCCTG
TTGATCAGCTTGAAAGCTTATCAAAATATGTATCAGCAGATGGTAAAGAGCCAAAGATTAATAAACTAAACGATGGTCGT
TTTCAAAAAGCAAAGCAAAGGGTTAAAAAGCAAGTTGAGGATATTGCAGATGACCTGTTGAAGCTTTATGCAGAGCGGAG
TCAGCAAAAAGGATTTCAGTTTTCTCCAGATGATGAGTTACAAAGAGCATTTGAGGAGGATTTTGCCTTTGTTGAGACTG
ATGATCAAGTTAGGTCCATAAAAGAGGTTAAAAAAGACATGGAGAGTGTCAGACCTATGGATCGTTTACTAGTTGGTGAT
GTTGGCTTTGGTAAGACTGAGGTGGCTATGAGAGCTGCTTTTAAGGCTATCGGTGACCATAAGCAGGTAGCTATCTTAGT
ACCAACAACCGTTTTAGCACAGCAGCATTATGAGAATTTTAGGGAAAGATTTGAGAACTATCCGGTTGAAATTGCTGTTT
TAAGCCGCTTTCGCAGTAAAAAAGAGCAATCTGAAAGTCTAGAAAGGCTAAAAAAGGGTCAGGTTGATATTATTATTGGG
ACTCATAGGTTGCTGTCAAAGGATGTGATTTTTTCAGATTTAGGCTTGATTGTCATTGATGAAGAGCAGCGTTTTGGTGT
TAAGCATAAAGAAACCCTAAAGGAATTAAAGACCAAGGTTGATGTCCTTACACTGACTGCAACGCCTATTCCTCGTACCC
TGCATATGTCTATGCTTGGTATTCGGGATTTATCAGTGATTGAGACGCCTCCTACGAATCGCTATCCTGTTCAGACTTAT
GTTTTAGAAAATAATCCTGGCTTGATTAGGGAAGCTATTATTCGAGAAATGGATCGTGGTGGTCAAGTCTTTTATGTTTA
CAATAAGGTTGACACTGTTGACAAGAAGGTGGCAGAGCTGCAAGAATTGGTTCCAGAGGCTTCTATTGGTTTTGTCCATG
GTCAAATGAGTGACATTCAGCTTGAGAATACCTTGATGGATTTTATCAATGGTGATTATGATGTTTTAGTTGCAACAACT
ATTATTGAGACAGGGGTTGATATTTCTAATGTCAATACCTTATTTATTGAAAATGCTGATCATATGGGACTATCAACTTT
GTATCAGCTTCGAGGTCGTGTTGGAAGGAGCAATCGTATTGCCTATGCTTATCTCATGTATAAGCCTGATAAGGTACTAA
CAGAGGTTTCCGAAAAAAGGTTAGAAGCTATTAAGGGCTTTACAGAGCTGGGATCTGGCTTTAAAATTGCTATGCGAGAT
TTATCTATTCGGGGAGCAGGAAATATATTGGGTGCTTCACAAAGTGGTTTTATTGACTCAGTTGGTTTTGACATGTATTC
TCAGCTGCTGGAGCAGGCTATTGCAAGCAAGCAAGGAAGAGCATTGACGCGACAAAAAGGTAATGCAGAGATTAATCTGC
ATATTGATGCTTATTTACCTAGTGATTATATCAAAGACGAGCGTCAAAAAATTGACATTTATAAGCGCATTCGTGAGATT
GACTCTAGAGCAGCTTATTCTGATTTGCAAGATGAAATCATGGATCGTTTTGGTGACTATCCTGATCAGGTAGCCTATTT
ACTGGAGATTGGCTTGTTGAAATACTACTTGGATACAGCCTTTGCTGAATTAGTCGAGAAGAGGGACCATCAGGTTATGG
TTAGGTTTGAGGTTGCTTCGCTTCAATACTATTTGACACAGGATTATTTTGAGGCTCTGTCAAAAACAAGCTTAAAAGCA
AGGATTAGTGAGCATCAGGGTAAAATTGAAATTATCTTTGATGTTAGACGTCAGAAAGACCATGTCATTTTAGAAGAATT
GATACTTTTTGGAGAGACACTTGGTGAGATTAAATCTAGAAAAGCTTCCTCATAA

Upstream 100 bases:

>100_bases
TAACAATCAATATAGCACTTGATAAGGTTGACAAAGCAATCAACTATTATTTACAGGAAAAAAGCATTGAGAAAACAATG
CAGCAATTTAATGGGTAGTT

Downstream 100 bases:

>100_bases
AACTAAGCAATCAAGTCTTCTGATTGTTATTAGTGGTTTTATGTCAAAATTATTAGCAGCCAGTTACCGTATCCCTTATC
AAAATTTGGTAGGGGATAGG

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1164_residues
MDILELFNQNKSIQTWQCDVTSLKRQLVMGLSGSSKAAAIASAYLSFQGKLVVVTSTQNDMEKLAGDLSALLDEGSIFQF
FADDTAAAEFIFSSMDKTISRIEALAFLSNPEARGILVISLAGLRILLPSPKTFQQGQIDLAVGVDTDLDNVVKKLVKIG
YQRVAQVLSPGEFSRRGDILDVYEVTQDLPVRIEFFGDEIDGIRSFDIESQKSLQKKDSTSIKPASDMIFEPEDFDRASH
NLEKQLQLAKAEHKGYLEELLTVTKEGLKHKDIRKFQSLFYDNEWTILDYLPKGTPVFFDDFQKLVDRNAKFDLELAHLL
TDDLQQGKSLPFLHYFADNYRELRHYKPATFFSNFHKGLGNIKFDKVYSLTQYAMQEFFNQFPLLIDEIKRYQKSGATVL
LQVESHQAYERLAKSLEAYQCQLPLVSADAIVLHQAQIIIGHLAGGFYFADEKLVLITEHEIYHKRLKRRARRTNMSNAE
RLKDYNELSKGDYVVHSVHGIGRFLGIETINIQGVHRDYVTIQYQQSDRISLPVDQLESLSKYVSADGKEPKINKLNDGR
FQKAKQRVKKQVEDIADDLLKLYAERSQQKGFQFSPDDELQRAFEEDFAFVETDDQVRSIKEVKKDMESVRPMDRLLVGD
VGFGKTEVAMRAAFKAIGDHKQVAILVPTTVLAQQHYENFRERFENYPVEIAVLSRFRSKKEQSESLERLKKGQVDIIIG
THRLLSKDVIFSDLGLIVIDEEQRFGVKHKETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTY
VLENNPGLIREAIIREMDRGGQVFYVYNKVDTVDKKVAELQELVPEASIGFVHGQMSDIQLENTLMDFINGDYDVLVATT
IIETGVDISNVNTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYKPDKVLTEVSEKRLEAIKGFTELGSGFKIAMRD
LSIRGAGNILGASQSGFIDSVGFDMYSQLLEQAIASKQGRALTRQKGNAEINLHIDAYLPSDYIKDERQKIDIYKRIREI
DSRAAYSDLQDEIMDRFGDYPDQVAYLLEIGLLKYYLDTAFAELVEKRDHQVMVRFEVASLQYYLTQDYFEALSKTSLKA
RISEHQGKIEIIFDVRRQKDHVILEELILFGETLGEIKSRKASS

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA