Click here to switch to the map view.

The map label for this gene is yvfS [H]

Identifier: 225861821

GI number: 225861821

Start: 1856169

End: 1856936

Strand: Reverse

Name: yvfS [H]

Synonym: SPT_1983

Alternate gene names: 225861821

Gene position: 1856936-1856169 (Counterclockwise)

Preceding gene: 225861822

Following gene: 225861820

Centisome position: 87.92

GC content: 39.58

Gene sequence:

>768_bases
TTGAAGAGACGCAGAAGGGAGATAACTAAGATGAAACGATGGATAGCACTTAGTAAGATAGAATTTTTATTGACCAAACG
ACAATTAATCTATTATCTATTGTCGGTAGGGATGCCGACGGCTTTCTATTTATTTTTTTCTGGTATCTATCAGGACACAC
CAGGTGAACCCGCGAATTTTATGCGTGATTACCTCATCTCCATGACTGCCTTTTCCATGATGTCGACAACTATCTTCTCA
TTTCCAGCTGTTTTACATACCGATAAGATGAACAACTGGCAGAAAACATTGCGTCATAGCCCTGTAAATATGGTAGAATA
TTATCTATCAAAGATAACAAGTATGCTGGTTGATTATTTGGTCTCAATTCTGGTTGTTTTTACAGTTGGACATTTTGTAA
GAGGTGTAGACATGCCTCTAGTAAAATGGGTTGGAGCTGCGATTTTGCTGATTGTGGGGAGTATTGCTTTTGTAGCACTT
GGCTTGACCTTGACTCTCTTACCAACTAGTCAGCTGATGTCTGTTGTGGGCAATCTTCTTTATCTAGGATTGGCTGTTTT
AGGCGGACTCTGGATGCCCATTTCTTTATTTCCAGACTGGATGCAAGCAGTTGGTAAGTGTCTCCCGACCTATCAATTGA
TGGAGTTGCTCAAGACCTTCTTAAACGAGGGTGGCATCAATCTATCAGCCACAGTTTATTTACTTGTTTTTTCAGCAGTT
TTATTTGGTTTGACTATTTACCTTCAAGGTCATAAGGAGAATGCTTAA

Upstream 100 bases:

>100_bases
GTCACTCGAGAAGCAGATGCTTTCTGGGAACTATTAGCCCAAGCAGGATGTAGGATGCAAGAAATCGAAGTTAATAATCG
TAGTTTGTTGAATACAATCT

Downstream 100 bases:

>100_bases
TGCTTGAAAGACTGAAAAGCATACACTATATGTTTTGGACCAGTTTGATTTTTATGCTTTTTCCCATCCTACCTGTAGTG
ATTGGGGAGCTTCCTGCTTG

Product: ABC-type multidrug transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKRRRREITKMKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGEPANFMRDYLISMTAFSMMSTTIFS
FPAVLHTDKMNNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFTVGHFVRGVDMPLVKWVGAAILLIVGSIAFVAL
GLTLTLLPTSQLMSVVGNLLYLGLAVLGGLWMPISLFPDWMQAVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSAV
LFGLTIYLQGHKENA

Sequences:

>Translated_255_residues
MKRRRREITKMKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGEPANFMRDYLISMTAFSMMSTTIFS
FPAVLHTDKMNNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFTVGHFVRGVDMPLVKWVGAAILLIVGSIAFVAL
GLTLTLLPTSQLMSVVGNLLYLGLAVLGGLWMPISLFPDWMQAVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSAV
LFGLTIYLQGHKENA
>Mature_255_residues
MKRRRREITKMKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGEPANFMRDYLISMTAFSMMSTTIFS
FPAVLHTDKMNNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFTVGHFVRGVDMPLVKWVGAAILLIVGSIAFVAL
GLTLTLLPTSQLMSVVGNLLYLGLAVLGGLWMPISLFPDWMQAVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSAV
LFGLTIYLQGHKENA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28837; Mature: 28837

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHEECCCCCC
>Mature Secondary Structure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HHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]