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The map label for this gene is 225861589

Identifier: 225861589

GI number: 225861589

Start: 1627380

End: 1628252

Strand: Reverse

Name: 225861589

Synonym: SPT_1709

Alternate gene names: NA

Gene position: 1628252-1627380 (Counterclockwise)

Preceding gene: 225861590

Following gene: 225861588

Centisome position: 77.09

GC content: 32.53

Gene sequence:

>873_bases
ATGCCACAAATAGAAAATCCTAGTGAGTATTTGACTCCTGCTAAACTAGATATTGGTCCTCTCCCATTGCCTCTTTCAAT
TATGAATGATTTAAAAGGAATAATAAACGCTGTCAATCATCATATTGGAATAAATAAATTTTTATTTGTGGGATCTCCAG
GTACTGGAAAAACTGAAAGTGTAAAGCAGGTGGCTAGACTTATTGGCAAGGAATTACTTGTAGTAGATTTCAGTCACTTA
GTAGATAGTAAGCTAGGGCAAACAGTCAAAAACTTAGCAACTCTTTTTAATGAAATCAATAATCTTCCTTTCAAGCAAAA
TTATATCATCCTATTTGATGAAATTGATTCCATAGTGTTGGATAGGGTTAATCAGAATGATTTAAGAGAAATGGGACGAG
TGACTTCTGCCTTTTTAAAGGAGTTGGATAGGCTGTCACCAGAAATTGTATTAATTGCAACAACAAATCTTTTTGAAAAT
CTTGATAAAGCAGTTACGAGAAGATTCGATGCCATAATTGACTTTGACCGTTATACTGATGAAGATAAAGTAGAAGTAGC
TACTATTATTTTAAATGAGTTATTAAAGCAATTTAAGAATGTAGCTAGAGATTTAAAATTATTTAAAAAAATTATCAATA
GTGCCAATGTAATACCGAATCCTGGTGATTTGAGAAACTCAATAAGAACGTCATTGGCATTTAGTGATCCATCAGATCCG
CATGATTACCAAAAACGCCTGCTAAGAAGTTTGCATAATGGTAGAAATTTATCTATTTCTAAATTATCGAAGCTAGGTTT
TACTGTTAGAGAAATTGAGATTTTGACAGGTGTTTCTAAGAGTAGTGTATCACGAGAGTTAAGCGAGGATTAA

Upstream 100 bases:

>100_bases
TAGAAATCAATCCATAGCAATTGCTCGGAACTTCAATAAACATGGTGATACACAAATAGCACAATATATTATGGGGTTAA
TGTCTCAAAGTGATAGATTC

Downstream 100 bases:

>100_bases
AATGAATACATTATTGACATTACGAGGTAAAAGCTTTACACAAAAATCAAGAAATAATGGTATGGGACCAATAACTATAC
CCAAAAAAACAATAATTACA

Product: ATPase of the AAA+ class

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPQIENPSEYLTPAKLDIGPLPLPLSIMNDLKGIINAVNHHIGINKFLFVGSPGTGKTESVKQVARLIGKELLVVDFSHL
VDSKLGQTVKNLATLFNEINNLPFKQNYIILFDEIDSIVLDRVNQNDLREMGRVTSAFLKELDRLSPEIVLIATTNLFEN
LDKAVTRRFDAIIDFDRYTDEDKVEVATIILNELLKQFKNVARDLKLFKKIINSANVIPNPGDLRNSIRTSLAFSDPSDP
HDYQKRLLRSLHNGRNLSISKLSKLGFTVREIEILTGVSKSSVSRELSED

Sequences:

>Translated_290_residues
MPQIENPSEYLTPAKLDIGPLPLPLSIMNDLKGIINAVNHHIGINKFLFVGSPGTGKTESVKQVARLIGKELLVVDFSHL
VDSKLGQTVKNLATLFNEINNLPFKQNYIILFDEIDSIVLDRVNQNDLREMGRVTSAFLKELDRLSPEIVLIATTNLFEN
LDKAVTRRFDAIIDFDRYTDEDKVEVATIILNELLKQFKNVARDLKLFKKIINSANVIPNPGDLRNSIRTSLAFSDPSDP
HDYQKRLLRSLHNGRNLSISKLSKLGFTVREIEILTGVSKSSVSRELSED
>Mature_289_residues
PQIENPSEYLTPAKLDIGPLPLPLSIMNDLKGIINAVNHHIGINKFLFVGSPGTGKTESVKQVARLIGKELLVVDFSHLV
DSKLGQTVKNLATLFNEINNLPFKQNYIILFDEIDSIVLDRVNQNDLREMGRVTSAFLKELDRLSPEIVLIATTNLFENL
DKAVTRRFDAIIDFDRYTDEDKVEVATIILNELLKQFKNVARDLKLFKKIINSANVIPNPGDLRNSIRTSLAFSDPSDPH
DYQKRLLRSLHNGRNLSISKLSKLGFTVREIEILTGVSKSSVSRELSED

Specific function: Unknown

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family [H]

Homologues:

Organism=Homo sapiens, GI229577436, Length=151, Percent_Identity=31.1258278145695, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323429, Length=127, Percent_Identity=35.4330708661417, Blast_Score=63, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324000, Length=132, Percent_Identity=34.0909090909091, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959 [H]

Pfam domain/function: PF00004 AAA [H]

EC number: NA

Molecular weight: Translated: 32634; Mature: 32503

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIENPSEYLTPAKLDIGPLPLPLSIMNDLKGIINAVNHHIGINKFLFVGSPGTGKTES
CCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
VKQVARLIGKELLVVDFSHLVDSKLGQTVKNLATLFNEINNLPFKQNYIILFDEIDSIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
DRVNQNDLREMGRVTSAFLKELDRLSPEIVLIATTNLFENLDKAVTRRFDAIIDFDRYTD
HCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
EDKVEVATIILNELLKQFKNVARDLKLFKKIINSANVIPNPGDLRNSIRTSLAFSDPSDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCH
HDYQKRLLRSLHNGRNLSISKLSKLGFTVREIEILTGVSKSSVSRELSED
HHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
PQIENPSEYLTPAKLDIGPLPLPLSIMNDLKGIINAVNHHIGINKFLFVGSPGTGKTES
CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
VKQVARLIGKELLVVDFSHLVDSKLGQTVKNLATLFNEINNLPFKQNYIILFDEIDSIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
DRVNQNDLREMGRVTSAFLKELDRLSPEIVLIATTNLFENLDKAVTRRFDAIIDFDRYTD
HCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
EDKVEVATIILNELLKQFKNVARDLKLFKKIINSANVIPNPGDLRNSIRTSLAFSDPSDP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCH
HDYQKRLLRSLHNGRNLSISKLSKLGFTVREIEILTGVSKSSVSRELSED
HHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]