Click here to switch to the map view.

The map label for this gene is 225861436

Identifier: 225861436

GI number: 225861436

Start: 1467445

End: 1467921

Strand: Reverse

Name: 225861436

Synonym: SPT_1544

Alternate gene names: NA

Gene position: 1467921-1467445 (Counterclockwise)

Preceding gene: 225861438

Following gene: 225861435

Centisome position: 69.5

GC content: 44.44

Gene sequence:

>477_bases
ATGGCAAAAGAACCGTGGCAAGAAGATATCTATGATCAAGAAGAATCAAGAGCAGAGCGTCGGCATCGAAACCACGGAGG
GGCTGATAGGATGGCTAATCGTATTTTGACGATCCTAGCTAGTATTTTCTTTGTAATTGTGGTGGTGATGGTCATCGTTC
TCATCTATCTATCATCGGGGGGGAGTAATCGCACAGCAGCCTTAAAAGACTTTCATGATTCTGATGCAAGTGTAGTACAA
ATCTCATCTTCAAGCAGTTCTCAGCCTGAGCAGAGTTCAGAGCCAGAATCTACTTCTAGTAGTTCAGAAGAAGCTGCTAA
TCCTGAAGGAACGATTAAAGTTCTCGCAGGAGAAGGGGAAGCAGCTATTGCCGCTCGTGCAGGAATCTCCATTGCTCAGT
TAGAGGCCTTGAATCCTGGGCACATGGCTACAGGATCTTGGTTTGCTAATCCAGGTGATGTTATAAAAATAAAATAG

Upstream 100 bases:

>100_bases
GGCAAAGCCCACAGGCGATACATCGTTCAGGTATAAGTGTGATTTTCATGTTCATATTTATATTGTAATAAGAAAAGTAA
AAAAAAACAAGGAGTAAGGT

Downstream 100 bases:

>100_bases
GAGCCGATATGAAAACAATTCAAATTGCTATTGATGGTCCTGCTTCCAGCGGTAAGAGTACGGTCGCAAAGATTATTGCT
AAGGATTTTGGATTCACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAKEPWQEDIYDQEESRAERRHRNHGGADRMANRILTILASIFFVIVVVMVIVLIYLSSGGSNRTAALKDFHDSDASVVQ
ISSSSSSQPEQSSEPESTSSSSEEAANPEGTIKVLAGEGEAAIAARAGISIAQLEALNPGHMATGSWFANPGDVIKIK

Sequences:

>Translated_158_residues
MAKEPWQEDIYDQEESRAERRHRNHGGADRMANRILTILASIFFVIVVVMVIVLIYLSSGGSNRTAALKDFHDSDASVVQ
ISSSSSSQPEQSSEPESTSSSSEEAANPEGTIKVLAGEGEAAIAARAGISIAQLEALNPGHMATGSWFANPGDVIKIK
>Mature_157_residues
AKEPWQEDIYDQEESRAERRHRNHGGADRMANRILTILASIFFVIVVVMVIVLIYLSSGGSNRTAALKDFHDSDASVVQI
SSSSSSQPEQSSEPESTSSSSEEAANPEGTIKVLAGEGEAAIAARAGISIAQLEALNPGHMATGSWFANPGDVIKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16870; Mature: 16739

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEPWQEDIYDQEESRAERRHRNHGGADRMANRILTILASIFFVIVVVMVIVLIYLSSG
CCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSNRTAALKDFHDSDASVVQISSSSSSQPEQSSEPESTSSSSEEAANPEGTIKVLAGEGE
CCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
AAIAARAGISIAQLEALNPGHMATGSWFANPGDVIKIK
EEEHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
AKEPWQEDIYDQEESRAERRHRNHGGADRMANRILTILASIFFVIVVVMVIVLIYLSSG
CCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSNRTAALKDFHDSDASVVQISSSSSSQPEQSSEPESTSSSSEEAANPEGTIKVLAGEGE
CCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
AAIAARAGISIAQLEALNPGHMATGSWFANPGDVIKIK
EEEHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA