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The map label for this gene is aldR [H]

Identifier: 225861400

GI number: 225861400

Start: 1438841

End: 1439221

Strand: Reverse

Name: aldR [H]

Synonym: SPT_1507

Alternate gene names: 225861400

Gene position: 1439221-1438841 (Counterclockwise)

Preceding gene: 225861401

Following gene: 225861399

Centisome position: 68.14

GC content: 43.31

Gene sequence:

>381_bases
ATGGCAAAAACAATTCATACAGACAAAGCTCCAAAGGCTATCGGACCCTATGTTCAAGGAAAAATCGTTGGCAACCTTTT
GTTTGCTAGCGGTCAAGTTCCCCTATCTCCTGAAACTGGGGAAATCGTTGGAGAAACGATCCAAGAACAGACAGAGCAAG
TCTTGAAAAACATCGGTGCTATTTTGGCAGAAGCAGGAACAGACTTTGACCATGTTGTCAAAACAACTTGCTTCTTGAGC
GATATGAACGACTTTGTTCCTTTTAATGAGGTTTACCAAACGGCCTTCAAAGAGGAATTCCCAGCTCGTTCAGCTGTGGA
GGTAGCTCGTCTTCCTCGTGATGTAAAAGTCGAAATTGAAGTCATCGCAGAGATTGGATAA

Upstream 100 bases:

>100_bases
TTTGACCCAAGTGACGACTTCATCCTATTTTCATCTGTCAGCAAGGCAGGGATGGATGAGGCTTGGGATGCAATCTTAGA
AAAATTGTGAGGAAAAGAAA

Downstream 100 bases:

>100_bases
GCTAGTTGAAGTTTGGTGTTGCCAAACTTCTTTTGATATAAGGAGAAAAAGATGACAAAGAAACAACTTCACTTGGTGAT
TGTGACAGGGATGAGTGGCG

Product: endoribonuclease L-PSP, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MAKTIHTDKAPKAIGPYVQGKIVGNLLFASGQVPLSPETGEIVGETIQEQTEQVLKNIGAILAEAGTDFDHVVKTTCFLS
DMNDFVPFNEVYQTAFKEEFPARSAVEVARLPRDVKVEIEVIAEIG

Sequences:

>Translated_126_residues
MAKTIHTDKAPKAIGPYVQGKIVGNLLFASGQVPLSPETGEIVGETIQEQTEQVLKNIGAILAEAGTDFDHVVKTTCFLS
DMNDFVPFNEVYQTAFKEEFPARSAVEVARLPRDVKVEIEVIAEIG
>Mature_125_residues
AKTIHTDKAPKAIGPYVQGKIVGNLLFASGQVPLSPETGEIVGETIQEQTEQVLKNIGAILAEAGTDFDHVVKTTCFLSD
MNDFVPFNEVYQTAFKEEFPARSAVEVARLPRDVKVEIEVIAEIG

Specific function: Implicated in the regulation of isoleucine biosynthesis [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=121, Percent_Identity=47.9338842975207, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI87082396, Length=126, Percent_Identity=52.3809523809524, Blast_Score=131, Evalue=1e-32,
Organism=Escherichia coli, GI87082213, Length=126, Percent_Identity=50, Blast_Score=129, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI71982075, Length=124, Percent_Identity=46.7741935483871, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148896, Length=122, Percent_Identity=47.5409836065574, Blast_Score=113, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71982068, Length=122, Percent_Identity=47.5409836065574, Blast_Score=112, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6322138, Length=119, Percent_Identity=42.8571428571429, Blast_Score=103, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6320899, Length=101, Percent_Identity=44.5544554455446, Blast_Score=90, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19921376, Length=124, Percent_Identity=41.9354838709677, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13719; Mature: 13588

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTIHTDKAPKAIGPYVQGKIVGNLLFASGQVPLSPETGEIVGETIQEQTEQVLKNIGA
CCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILAEAGTDFDHVVKTTCFLSDMNDFVPFNEVYQTAFKEEFPARSAVEVARLPRDVKVEIE
HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEE
VIAEIG
EEEECC
>Mature Secondary Structure 
AKTIHTDKAPKAIGPYVQGKIVGNLLFASGQVPLSPETGEIVGETIQEQTEQVLKNIGA
CCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILAEAGTDFDHVVKTTCFLSDMNDFVPFNEVYQTAFKEEFPARSAVEVARLPRDVKVEIE
HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEE
VIAEIG
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335274; 11337471 [H]