| Definition | Streptococcus pneumoniae Taiwan19F-14, complete genome. |
|---|---|
| Accession | NC_012469 |
| Length | 2,112,148 |
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The map label for this gene is ybbP [H]
Identifier: 225861395
GI number: 225861395
Start: 1434022
End: 1434879
Strand: Reverse
Name: ybbP [H]
Synonym: SPT_1502
Alternate gene names: 225861395
Gene position: 1434879-1434022 (Counterclockwise)
Preceding gene: 225861397
Following gene: 225861394
Centisome position: 67.93
GC content: 39.28
Gene sequence:
>858_bases ATGAATTTTCAACAATTATCCAATCTGCAATATTGGACCAGTTTGTTTGCAAGTCCATGGACGATAGCTATCAATCTGAT TGATATTTTGATTGTTGCTTATATTTTATACCATTTTACAAAAGCTATTGCAGGAACCAAGATTATGATTTTGGTACGTG GAGTTTTGGTGTTTATTTTAGCTCAAATCCTTGCAAATATGATTGGTTTGACTACGATTTCTTGGTTAATCAATCAAATT ATTACTTATGGGGTTATTGCGGCGGTTGTTATCTTCTCTCCAGAGATTCGGACTGGTTTGGAACGTTTGGGAAGAGCGAC AGATTTCTTTTCCAATGCCCCTATTAGTGCTGAGGAACAGATGATTCGTGCCTTTGTTAAGTCTGTTGAATACATGAGTC CTCGTAAAATCGGGGCCTTGGTTGCTATTCAGCGTGTACGTACCTTGCAGGAGTATATTTCGACAGGAATTCCCTTGGAT GCTAAGATTTCTGCAGAACTTCTCATTAACATTTTTATTCCCAACACTCCCCTACATGATGGTGCGGTGATTATCAAAGA AGAACGTATCGCTGTGACGTCTGCCTATCTGCCCTTGACAAAAAACACAGGGATTTCCAAGGAATTTGGGACCAGACACC GGGCGGCTATCGGTTTATCAGAAGTCTCAGATGCCTTGACTTTTGTCGTATCAGAGGAAACGGGAGGAATTTCGATAACC TATAATGGAAGGTTTAAGCACAACCTAACACTTGATGAATTTGAAACAGAATTACGTGAAATCTTACTTCCAAAAGAGGA AGTGGGTCTTAGTTTTAAAGAACGATTGCTAGGAGGATGGAAACATGAAAAAAAATAG
Upstream 100 bases:
>100_bases ATCATATTTTTGTTCAATGTAAAATGGACTAGGATAGGGAAAAAAATGCCAGAAAATGGTATAATAGGACGAAAGTGTTT TGATAGGGAGGATATCAGGG
Downstream 100 bases:
>100_bases TTTATATATCATATCCTCACTCTTTTTTGCTTGTGTCTTATTTGTCTATGCTACGGCGACGAATTTTCAAAACAGTACCA GTGCTAGGCAGGTAAAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNFQQLSNLQYWTSLFASPWTIAINLIDILIVAYILYHFTKAIAGTKIMILVRGVLVFILAQILANMIGLTTISWLINQI ITYGVIAAVVIFSPEIRTGLERLGRATDFFSNAPISAEEQMIRAFVKSVEYMSPRKIGALVAIQRVRTLQEYISTGIPLD AKISAELLINIFIPNTPLHDGAVIIKEERIAVTSAYLPLTKNTGISKEFGTRHRAAIGLSEVSDALTFVVSEETGGISIT YNGRFKHNLTLDEFETELREILLPKEEVGLSFKERLLGGWKHEKK
Sequences:
>Translated_285_residues MNFQQLSNLQYWTSLFASPWTIAINLIDILIVAYILYHFTKAIAGTKIMILVRGVLVFILAQILANMIGLTTISWLINQI ITYGVIAAVVIFSPEIRTGLERLGRATDFFSNAPISAEEQMIRAFVKSVEYMSPRKIGALVAIQRVRTLQEYISTGIPLD AKISAELLINIFIPNTPLHDGAVIIKEERIAVTSAYLPLTKNTGISKEFGTRHRAAIGLSEVSDALTFVVSEETGGISIT YNGRFKHNLTLDEFETELREILLPKEEVGLSFKERLLGGWKHEKK >Mature_285_residues MNFQQLSNLQYWTSLFASPWTIAINLIDILIVAYILYHFTKAIAGTKIMILVRGVLVFILAQILANMIGLTTISWLINQI ITYGVIAAVVIFSPEIRTGLERLGRATDFFSNAPISAEEQMIRAFVKSVEYMSPRKIGALVAIQRVRTLQEYISTGIPLD AKISAELLINIFIPNTPLHDGAVIIKEERIAVTSAYLPLTKNTGISKEFGTRHRAAIGLSEVSDALTFVVSEETGGISIT YNGRFKHNLTLDEFETELREILLPKEEVGLSFKERLLGGWKHEKK
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 31854; Mature: 31854
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFQQLSNLQYWTSLFASPWTIAINLIDILIVAYILYHFTKAIAGTKIMILVRGVLVFIL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AQILANMIGLTTISWLINQIITYGVIAAVVIFSPEIRTGLERLGRATDFFSNAPISAEEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH MIRAFVKSVEYMSPRKIGALVAIQRVRTLQEYISTGIPLDAKISAELLINIFIPNTPLHD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCC GAVIIKEERIAVTSAYLPLTKNTGISKEFGTRHRAAIGLSEVSDALTFVVSEETGGISIT CEEEEEECCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHEEEEEECCCCEEEE YNGRFKHNLTLDEFETELREILLPKEEVGLSFKERLLGGWKHEKK ECCEEEECCCHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCCCCCC >Mature Secondary Structure MNFQQLSNLQYWTSLFASPWTIAINLIDILIVAYILYHFTKAIAGTKIMILVRGVLVFIL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AQILANMIGLTTISWLINQIITYGVIAAVVIFSPEIRTGLERLGRATDFFSNAPISAEEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH MIRAFVKSVEYMSPRKIGALVAIQRVRTLQEYISTGIPLDAKISAELLINIFIPNTPLHD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCC GAVIIKEERIAVTSAYLPLTKNTGISKEFGTRHRAAIGLSEVSDALTFVVSEETGGISIT CEEEEEECCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHEEEEEECCCCEEEE YNGRFKHNLTLDEFETELREILLPKEEVGLSFKERLLGGWKHEKK ECCEEEECCCHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]