| Definition | Streptococcus pneumoniae Taiwan19F-14, complete genome. |
|---|---|
| Accession | NC_012469 |
| Length | 2,112,148 |
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The map label for this gene is yjeF [C]
Identifier: 225861276
GI number: 225861276
Start: 1311794
End: 1312666
Strand: Reverse
Name: yjeF [C]
Synonym: SPT_1375
Alternate gene names: 225861276
Gene position: 1312666-1311794 (Counterclockwise)
Preceding gene: 225861277
Following gene: 225861275
Centisome position: 62.15
GC content: 43.3
Gene sequence:
>873_bases ATGAAAGTGATTAATCAAACCTTATTAGAAAAAGTTATTATTGAACGTTCTCGTTCAAGTCATAAAGGAGATTATGGTCG TCTGCTGCTGCTTGGTGGTACTTATCCTTATGGAGGTGCCATCATCATGGCTGCTTTAGCAGCTGTAAAAAGCGGTGCAG GATTGGTGACCGTTGGAACGGACAGGGAAAATATCCTGGCTCTGCACAGCCATTTACCTGAGCCTATGGCCTTTTCTCTT CAAGACCAGCAATTGTTAAAAGAGCAATTGGAGAAGGCAGAAGTTGTCTTGCTGGGGCCTGGTTTACGAGACGATGCTTC TGGAGAAAATCTAGTAAAACAGGTCTTTGTTAATTTAAGCCAAAATCAGATTTTGATTGTAGACGGAGGTGCCTTGACCA TTCTTGCTAGGACAAGTTTGTCATTTCCCTCAAGCCAGCTTATCCTAACTCCTCACCAAAAAGAATGGGAAAAATTATCT GGAATTACGATTGAAAAGCAAAAGGAAGATGCAACGGCTAGTGTTCTGACTTCCTTCCCTCAAGGAACAATTTTGGTGGA GAAAGGCCCAGCTACTCGTATTTGGGAAGTTGGCCAATCTGATTATTACCAGTTACAGGTTGGTGGTCCTTATCAGGCGA CTGGGGGAATGGGAGATACTCTGGCTGGGATGATCGCAGGATTTGTAGGCCAATTCCGACAGGCCAGTCTCTACGAGCGT GTGGCAGTAGCGACCCATCTTCATTCAGCCATAGCCCAAGAACTATCTCAAGAAAATTATGTGGTCTTACCGACGGAAAT CAGCAGGTATCTTCCCAAAATAATGAAAATTATTTGTCAACAAGAGAGGGCAAGAAAAGATAAACTTGTTTAA
Upstream 100 bases:
>100_bases TCTAAAATGGTAGAAATGAATATTAAATTTTAGATATAAGATTACAAAAGGAGGTCTGCGTCTCCTTTTTATTGTATAAT AAAAGTGAGAGGAAAAAAGG
Downstream 100 bases:
>100_bases AATAGACAGATAAATCTACTTCCTTCTCTTAATTTATGATTCTTGAAATGCGCCTGCTTTAAGGCTAAACTAGACGTATC AAAGTTAAGAGTTTGTTTTT
Product: putative YjeF homolog, C-terminus
Products: NA
Alternate protein names: ORF1091 [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKVINQTLLEKVIIERSRSSHKGDYGRLLLLGGTYPYGGAIIMAALAAVKSGAGLVTVGTDRENILALHSHLPEPMAFSL QDQQLLKEQLEKAEVVLLGPGLRDDASGENLVKQVFVNLSQNQILIVDGGALTILARTSLSFPSSQLILTPHQKEWEKLS GITIEKQKEDATASVLTSFPQGTILVEKGPATRIWEVGQSDYYQLQVGGPYQATGGMGDTLAGMIAGFVGQFRQASLYER VAVATHLHSAIAQELSQENYVVLPTEISRYLPKIMKIICQQERARKDKLV
Sequences:
>Translated_290_residues MKVINQTLLEKVIIERSRSSHKGDYGRLLLLGGTYPYGGAIIMAALAAVKSGAGLVTVGTDRENILALHSHLPEPMAFSL QDQQLLKEQLEKAEVVLLGPGLRDDASGENLVKQVFVNLSQNQILIVDGGALTILARTSLSFPSSQLILTPHQKEWEKLS GITIEKQKEDATASVLTSFPQGTILVEKGPATRIWEVGQSDYYQLQVGGPYQATGGMGDTLAGMIAGFVGQFRQASLYER VAVATHLHSAIAQELSQENYVVLPTEISRYLPKIMKIICQQERARKDKLV >Mature_290_residues MKVINQTLLEKVIIERSRSSHKGDYGRLLLLGGTYPYGGAIIMAALAAVKSGAGLVTVGTDRENILALHSHLPEPMAFSL QDQQLLKEQLEKAEVVLLGPGLRDDASGENLVKQVFVNLSQNQILIVDGGALTILARTSLSFPSSQLILTPHQKEWEKLS GITIEKQKEDATASVLTSFPQGTILVEKGPATRIWEVGQSDYYQLQVGGPYQATGGMGDTLAGMIAGFVGQFRQASLYER VAVATHLHSAIAQELSQENYVVLPTEISRYLPKIMKIICQQERARKDKLV
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=245, Percent_Identity=33.469387755102, Blast_Score=100, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6322698, Length=238, Percent_Identity=25.6302521008403, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 [H]
Pfam domain/function: PF01256 Carb_kinase [H]
EC number: NA
Molecular weight: Translated: 31637; Mature: 31637
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS01050 UPF0031_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVINQTLLEKVIIERSRSSHKGDYGRLLLLGGTYPYGGAIIMAALAAVKSGAGLVTVGT CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECC DRENILALHSHLPEPMAFSLQDQQLLKEQLEKAEVVLLGPGLRDDASGENLVKQVFVNLS CCHHHHHHHHCCCCCCEECCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCC QNQILIVDGGALTILARTSLSFPSSQLILTPHQKEWEKLSGITIEKQKEDATASVLTSFP CCEEEEEECCEEEEEEECCCCCCCCCEEECCCHHHHHHHCCCEEECCCCHHHHHHHHHCC QGTILVEKGPATRIWEVGQSDYYQLQVGGPYQATGGMGDTLAGMIAGFVGQFRQASLYER CCEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAVATHLHSAIAQELSQENYVVLPTEISRYLPKIMKIICQQERARKDKLV HHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKVINQTLLEKVIIERSRSSHKGDYGRLLLLGGTYPYGGAIIMAALAAVKSGAGLVTVGT CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECC DRENILALHSHLPEPMAFSLQDQQLLKEQLEKAEVVLLGPGLRDDASGENLVKQVFVNLS CCHHHHHHHHCCCCCCEECCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHCCC QNQILIVDGGALTILARTSLSFPSSQLILTPHQKEWEKLSGITIEKQKEDATASVLTSFP CCEEEEEECCEEEEEEECCCCCCCCCEEECCCHHHHHHHCCCEEECCCCHHHHHHHHHCC QGTILVEKGPATRIWEVGQSDYYQLQVGGPYQATGGMGDTLAGMIAGFVGQFRQASLYER CCEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAVATHLHSAIAQELSQENYVVLPTEISRYLPKIMKIICQQERARKDKLV HHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8930919 [H]